Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL093C
Length:
220
Number of sequences:
5887
Description:
YBL093C ROX3 SGDID:S000000189, Chr II from 44918-44256, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25046    220   MED19_YEAST Mediator of RNA polymerase II tra...2205e-164     459     100     100GO:0070847; C:core mediator complex; IDA:SGD.::GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.::GO:0001135; F:RNA polymerase II transcription factor recruiting transcription factor activity; IMP:SGD.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0001113; P:transcriptional open complex formation at RNA polymerase II promoter; IMP:SGD.
2Q6FJ36    201   MED19_CANGA Mediator of RNA polymerase II tra...2143e-94     280     67     78GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
3Q751I6    207   MED19_ASHGO Mediator of RNA polymerase II tra...2212e-85     258     61     73GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
4Q6CP83    206   MED19_KLULA Mediator of RNA polymerase II tra...2147e-83     252     58     73GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
5A3LV29    173   MED19_PICST Mediator of RNA polymerase II tra...650.000000000000003     74.7     51     71GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
6Q6C6D6    181   MED19_YARLI Mediator of RNA polymerase II tra...660.00003     46.6     39     61GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
7Q9Y7N2    138   MED19_SCHPO Mediator of RNA polymerase II tra...600.0004     42.7     40     62GO:0005829; C:cytosol; IDA:PomBase.::GO:0016592; C:mediator complex; IDA:PomBase.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IC:PomBase.
8Q6MW04    333   MED19_NEUCR Mediator of RNA polymerase II tra...620.075     37.4     40     55GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
9Q2GW22    326   MED19_CHAGB Mediator of RNA polymerase II tra...560.17     36.2     36     55GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
10O68129    444   TIG_RHOCB Trigger factor OS=Rhodobacter capsu...1520.3     35.4     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
11Q55CS9    651   ATPB_DICDI ATP synthase subunit beta, mitocho...973.2     32.3     27     44GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005754; C:mitochondrial proton-transporting ATP synthase, catalytic core; ISS:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; ISS:dictyBase.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; ISS:dictyBase.
12Q38WK5    476   ATPB_LACSS ATP synthase subunit beta OS=Lacto...434     32     35     58GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
13B1MW85    466   ATPB_LEUCK ATP synthase subunit beta OS=Leuco...434.7     32     37     58GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
14Q03V29    466   ATPB_LEUMM ATP synthase subunit beta OS=NCDO ...435.4     31.6     37     58GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
15B2G691    475   ATPB_LACRJ ATP synthase subunit beta OS=Lacto...776.1     31.6     29     57GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
16A5VIR1    475   ATPB_LACRD ATP synthase subunit beta OS=Lacto...776.1     31.6     29     57GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
17P00830    511   ATPB_YEAST ATP synthase subunit beta, mitocho...976.7     31.2     27     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0005758; C:mitochondrial intermembrane space; TAS:Reactome.::GO:0005754; C:mitochondrial proton-transporting ATP synthase, catalytic core; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IMP:SGD.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IDA:SGD.
18Q7VJ82    2894   RPOBC_HELHP Bifunctional DNA-directed RNA pol...577.2     31.6     33     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
19P49376    505   ATPB_KLULA ATP synthase subunit beta, mitocho...777.4     31.2     29     52GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
20A8YUK1    479   ATPB_LACH4 ATP synthase subunit beta OS=Lacto...438.5     31.2     35     58GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
21Q03EL4    469   ATPB_PEDPA ATP synthase subunit beta OS=Pedio...7810     30.8     24     55GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0008553; F:hydrogen-exporting ATPase activity, phosphorylative mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.::GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 21 1 - 21
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::