Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List


UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL014C
Length:
894
Number of sequences:
5887
Description:
YBL014C RRN6 SGDID:S000000110, Chr II from 201748-199064, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32786    894   RRN6_YEAST RNA polymerase I-specific transcri...8940     1831     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0070860; C:RNA polymerase I core factor complex; IDA:SGD.
GO:0001187; F:RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity; IC:SGD.::GO:0001013; F:RNA polymerase I regulatory region DNA binding; IDA:SGD.::GO:0001179; F:RNA polymerase I transcription factor binding; IDA:SGD.
2Q4UU85    378   RPFG_XANC8 Cyclic di-GMP phosphodiesterase re...1544.9     34.3     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0071111; F:cyclic-guanylate-specific phosphodiesterase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:InterPro.::GO:0000156; F:two-component response regulator activity; IEA:InterPro.
GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 2 1 - 2
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::