Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL005W-B
Length:
1755
Number of sequences:
5887
Description:
YBL005W-B YBL005W-B SGDID:S000002147, Chr II from 221330-222634,222636-226598, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q12293    438   YO22A_YEAST Transposon Ty2-OR2 Gag polyprotei...4355e-103     343     45     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
92P0C2J7    1802   YH41B_YEAST Transposon Ty4-H Gag-Pol polyprot...2957e-32     140     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
93P47024    1803   YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprot...2951e-31     139     31     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
94P10978    1328   POLX_TOBAC Retrovirus-related Pol polyprotein...4032e-19     99.8     23     42
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
95P04146    1409   COPIA_DROME Copia protein OS=Drosophila melan...4730.00000000006     71.6     22     41
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
96P25600    308   YCH4_YEAST Putative transposon Ty5-1 protein ...3280.00002     52.4     23     44
97Q87040    1146   POL_SFVCP Pro-Pol polyprotein OS=Simian foamy...2050.00007     51.6     26     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
98P14350    1143   POL_FOAMV Pro-Pol polyprotein OS=Human spumar...2050.0007     48.5     25     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
99P0A3L4    195   Y4601_AGRT7 Insertion element IS136 uncharact...850.081     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
100P0A3L3    195   Y4601_AGRT5 Insertion element IS136 uncharact...850.081     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
101Q49378    294   P32_MYCGA P32 adhesin OS=Mycoplasma gallisept...1450.26     39.3     33     39GO:0033111; C:attachment organelle membrane; IEA:UniProtKB-SubCell.::GO:0042995; C:cell projection; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0020035; P:cytoadherence to microvasculature, mediated by symbiont protein; IEA:UniProtKB-KW.::GO:0007157; P:heterophilic cell-cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
102Q8H111    909   NLP1_ARATH Protein NLP1 OS=Arabidopsis thalia...1290.31     39.7     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
103P0AAV4    218   YBGJ_ECOLI Uncharacterized protein ybgJ OS=Es...960.64     37.4     31     42
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
104P0AAV5    218   YBGJ_ECO57 Uncharacterized protein ybgJ OS=Es...960.64     37.4     31     42
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
105Q8VEK2    361   RHBD2_MOUSE Rhomboid domain-containing protei...1440.77     37.7     25     37GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
106Q8IXK0    858   PHC2_HUMAN Polyhomeotic-like protein 2 OS=Hom...1361.2     37.7     25     44GO:0035102; C:PRC1 complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
107P14345    86   ICP47_HHV2H ICP47 protein OS=2). GN=US12 ...671.3     34.7     30     42GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.
108Q9VT65    925   CANB_DROME Calpain-B OS=Drosophila melanogast...1121.8     37     26     37GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005509; F:calcium ion binding; NAS:UniProtKB.::GO:0004198; F:calcium-dependent cysteine-type endopeptidase activity; IDA:UniProtKB.
GO:0016540; P:protein autoprocessing; TAS:FlyBase.::GO:0006508; P:proteolysis; IDA:UniProtKB.
109B4P184    115   VTU4_DROYA Vitelline membrane protein Vm32E O...473.2     33.9     40     49GO:0005615; C:extracellular space; ISS:UniProtKB.
GO:0008316; F:structural constituent of vitelline membrane; ISS:UniProtKB.
GO:0007305; P:vitelline membrane formation involved in chorion-containing eggshell formation; ISS:UniProtKB.
110Q3MID3    520   ARFG2_RAT ADP-ribosylation factor GTPase-acti...684.2     35.8     29     50GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
GO:0008060; F:ARF GTPase activator activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0032312; P:regulation of ARF GTPase activity; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
111Q6LPQ6    466   SYN_PHOPR Asparagine--tRNA ligase OS=Photobac...1004.5     35.4     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004816; F:asparagine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006421; P:asparaginyl-tRNA aminoacylation; IEA:InterPro.
112Q6ZNG9    492   KRBA2_HUMAN KRAB-A domain-containing protein ...1295.2     35.4     23     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
113Q5HU13    809   SYL_CAMJR Leucine--tRNA ligase OS=Campylobact...1789.4     34.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
114A7H2R6    809   SYL_CAMJD Leucine--tRNA ligase OS=269.97). GN...17810     34.7     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
records
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