Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YBL004W
Length:
2493
Number of sequences:
5887
Description:
YBL004W UTP20 SGDID:S000000100, Chr II from 227636-235117, Genome Release 64-1-1, Verified ORF, "Component of the small-subunit (SSU) processome, which is involved in the biogenesis of the 18S rRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P35194    2493   UTP20_YEAST U3 small nucleolar RNA-associated...24930     5097     100     100GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.::GO:0030688; C:preribosome, small subunit precursor; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:HGNC.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
2O75691    2785   UTP20_HUMAN Small subunit processome componen...3648e-28     127     27     48GO:0030686; C:90S preribosome; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0030688; C:preribosome, small subunit precursor; ISS:UniProtKB.::GO:0032040; C:small-subunit processome; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; TAS:ProtInc.
3Q5XG71    2788   UTP20_MOUSE Small subunit processome componen...2422e-23     114     29     52GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
4O60055    2493   UTP20_SCHPO U3 small nucleolar RNA-associated...2681e-35     153     34     55GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
5Q8K901    284   DAPF_BUCAP Diaminopimelate epimerase OS=Buchn...624.2     35.8     37     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008837; F:diaminopimelate epimerase activity; IEA:EC.
GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:InterPro.
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