Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q9W328    313   LST8_DROME Protein LST8 homolog OS=Drosophila...941.9     34.3     24     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
632O95834    649   EMAL2_HUMAN Echinoderm microtubule-associated...991.9     34.7     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0003824; F:catalytic activity; IEA:InterPro.
GO:0007605; P:sensory perception of sound; TAS:ProtInc.::GO:0007601; P:visual perception; TAS:ProtInc.
633Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...751.9     34.7     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
634Q9D2V7    922   CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...1071.9     34.7     29     44GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
635Q10437    543   BUN62_SCHPO UBP9-binding protein bun62 OS=Sch...881.9     34.7     25     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:2000158; P:positive regulation of ubiquitin-specific protease activity; IMP:PomBase.
636Q5AB15    505   IPI3_CANAL Pre-rRNA-processing protein IPI3 O...631.9     34.7     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
637Q9LXN4    1024   HIRA_ARATH Protein HIRA OS=Arabidopsis thalia...1521.9     34.7     21     39GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
638Q9CX97    388   WDR55_MOUSE WD repeat-containing protein 55 O...971.9     34.3     28     47GO:0005737; C:cytoplasm; IMP:UniProtKB.::GO:0005730; C:nucleolus; IMP:UniProtKB.
GO:0006364; P:rRNA processing; IMP:UniProtKB.
639Q6P5M2    305   WDR61_DANRE WD repeat-containing protein 61 O...2642     34.3     19     41GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
640Q68EI0    431   WDR18_DANRE WD repeat-containing protein 18 O...782     34.3     24     47
GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; IMP:UniProtKB.
641Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...452     34.3     36     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
642Q7ZVL2    779   WDR24_DANRE WD repeat-containing protein 24 O...832     34.7     34     49
643Q5JTN6    314   WDR38_HUMAN WD repeat-containing protein 38 O...692.1     34.3     29     52
644Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...712.1     34.3     31     49GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
645Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...832.1     34.3     33     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
646Q2GT28    453   LIS12_CHAGB Nuclear distribution protein PAC1...1102.1     34.3     31     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
647B5FZ19    325   EIF3I_TAEGU Eukaryotic translation initiation...832.1     34.3     27     48GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
648P38129    798   TAF5_YEAST Transcription initiation factor TF...592.2     34.3     27     49GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.::GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IMP:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IC:SGD.
649A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...1362.2     33.9     27     45
650Q6ZMW3    1958   EMAL6_HUMAN Echinoderm microtubule-associated...792.2     34.7     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
651O14170    703   POP2_SCHPO WD repeat-containing protein pop2 ...1092.2     34.3     33     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0032876; P:negative regulation of DNA endoreduplication; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:PomBase.
652Q54IY5    1276   GEMI5_DICDI Component of gems protein 5 OS=Di...732.2     34.7     29     44GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
653A8XEN7    554   DCA11_CAEBR DDB1- and CUL4-associated factor ...722.2     34.3     32     49
GO:0008340; P:determination of adult lifespan; ISS:UniProtKB.
654Q05B30    751   WDR91_XENTR WD repeat-containing protein 91 O...1082.2     34.3     24     44
655Q5FVP5    386   WDR89_RAT WD repeat-containing protein 89 OS=...1662.2     34.3     23     44
656Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...772.2     34.3     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
657O89053    461   COR1A_MOUSE Coronin-1A OS=Mus musculus (Mouse...1012.2     34.3     28     48GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001772; C:immunological synapse; IDA:MGI.::GO:0030027; C:lamellipodium; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IDA:MGI.
GO:0007015; P:actin filament organization; IMP:MGI.::GO:0006816; P:calcium ion transport; IMP:MGI.::GO:0048873; P:homeostasis of number of cells within a tissue; IMP:MGI.::GO:0030595; P:leukocyte chemotaxis; IMP:MGI.::GO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome.::GO:0001845; P:phagolysosome assembly; IBA:RefGenome.::GO:0050918; P:positive chemotaxis; IBA:RefGenome.::GO:0030335; P:positive regulation of cell migration; IMP:MGI.::GO:0042102; P:positive regulation of T cell proliferation; IMP:MGI.::GO:0030833; P:regulation of actin filament polymerization; IMP:MGI.::GO:0008360; P:regulation of cell shape; IMP:MGI.::GO:0034097; P:response to cytokine stimulus; IMP:MGI.::GO:0043029; P:T cell homeostasis; IMP:MGI.::GO:0032796; P:uropod organization; IMP:MGI.
658A0JMQ0    777   BOP1_DANRE Ribosome biogenesis protein bop1 O...692.2     34.3     28     52GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
659Q59WJ4    543   PFS2_CANAL Polyadenylation factor subunit 2 O...862.2     34.3     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
660Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...422.2     34.3     40     57GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
661O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1352.3     34.3     21     33GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
records
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