Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...2060.97     35.4     23     41
512Q9USR0    404   CKN1_SCHPO DNA excision repair protein ckn1 O...1380.97     35.4     25     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
513P56094    682   TUP1_KLULA General transcriptional corepresso...880.98     35.4     31     56
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
514Q7TNG5    649   EMAL2_MOUSE Echinoderm microtubule-associated...990.98     35.4     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.
515A4RD35    1269   SEC31_MAGO7 Protein transport protein SEC31 O...2760.98     35.8     19     38GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
516Q94BR4    523   PR19A_ARATH Pre-mRNA-processing factor 19 hom...651     35.4     31     54GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
517Q9FUY2    931   LEUNG_ARATH Transcriptional corepressor LEUNI...781     35.4     33     49GO:0005634; C:nucleus; IDA:TAIR.
GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0080001; P:mucilage extrusion from seed coat; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
518Q40507    375   GBB3_TOBAC Guanine nucleotide-binding protein...681     35     29     50
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
519Q15751    4861   HERC1_HUMAN Probable E3 ubiquitin-protein lig...861     35.8     28     49GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; TAS:ProtInc.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0016881; F:acid-amino acid ligase activity; IEA:InterPro.::GO:0005086; F:ARF guanyl-nucleotide exchange factor activity; TAS:ProtInc.
GO:0006464; P:protein modification process; IEA:InterPro.::GO:0006810; P:transport; IEA:UniProtKB-KW.
520Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...771     35     29     49
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
521Q2GTM8    341   EIF3I_CHAGB Eukaryotic translation initiation...421     35     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
522Q82XN9    425   TOLB_NITEU Protein TolB OS=Nitrosomonas europ...2481     35.4     21     37GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
GO:0017038; P:protein import; IEA:InterPro.
523Q9NW82    654   WDR70_HUMAN WD repeat-containing protein 70 O...831     35.4     33     53
524Q2UPI0    438   CIAO1_ASPOR Probable cytosolic iron-sulfur pr...341     35.4     47     65
525B8MWR8    438   CIAO1_ASPFN Probable cytosolic iron-sulfur pr...341     35.4     47     65
526Q09715    614   TUP11_SCHPO Transcriptional repressor tup11 O...781.1     35.4     28     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IGI:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0006342; P:chromatin silencing; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
527Q1LV15    415   WDR69_DANRE Outer row dynein assembly protein...661.1     35     27     52GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
GO:0070286; P:axonemal dynein complex assembly; IMP:UniProtKB.::GO:0060285; P:ciliary cell motility; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.
528P16649    713   TUP1_YEAST General transcriptional corepresso...1351.1     35.4     26     47GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042393; F:histone binding; IDA:SGD.::GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0036033; F:mediator complex binding; IDA:SGD.::GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0043486; P:histone exchange; IMP:SGD.::GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0001198; P:negative regulation of mating-type specific transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
529Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...721.1     35.4     31     53GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
530Q8TED0    518   UTP15_HUMAN U3 small nucleolar RNA-associated...1441.1     35.4     26     44GO:0005737; C:cytoplasm; IDA:LIFEdb.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
531Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...951.1     35     23     41GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
532Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...1171.1     35.4     25     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
533P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...681.1     35     29     51
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
534O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...661.1     35.4     32     47
535Q6NS57    1503   MABP1_MOUSE Mitogen-activated protein kinase-...711.1     35.4     34     52
GO:0005515; F:protein binding; IPI:MGI.
GO:0007256; P:activation of JNKK activity; IDA:MGI.
536Q12038    1033   SRO7_YEAST Lethal(2) giant larvae protein hom...841.1     35.4     25     50GO:0005829; C:cytosol; IDA:SGD.::GO:0005886; C:plasma membrane; IDA:SGD.
GO:0017137; F:Rab GTPase binding; IDA:SGD.::GO:0000149; F:SNARE binding; IPI:SGD.
GO:0006887; P:exocytosis; IGI:SGD.::GO:0006893; P:Golgi to plasma membrane transport; IPI:SGD.::GO:0007264; P:small GTPase mediated signal transduction; IPI:SGD.
537Q9BV38    432   WDR18_HUMAN WD repeat-containing protein 18 O...611.1     35     26     54
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
538Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...631.1     35     30     56
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
539C4JPW9    459   LIS12_UNCRE Nuclear distribution protein PAC1...781.1     35     27     56GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
540Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...711.1     35     31     51
541B4JB43    326   EIF3I_DROGR Eukaryotic translation initiation...1711.1     35     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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