Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481O14053    902   YC47_SCHPO Uncharacterized WD repeat-containi...630.8     35.8     33     54GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; NAS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
482Q0VA16    622   WDR70_XENTR WD repeat-containing protein 70 O...640.8     35.8     33     55
483Q9JHB4    367   WDR31_MOUSE WD repeat-containing protein 31 O...730.8     35.4     29     44
484Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...670.81     35.4     33     51GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
485B0W517    425   WDR12_CULQU Ribosome biogenesis protein WDR12...930.81     35.4     26     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
486Q96MT7    982   WDR52_HUMAN WD repeat-containing protein 52 O...520.82     35.8     27     54
487Q10051    492   PRP19_CAEEL Pre-mRNA-processing factor 19 hom...740.85     35.4     26     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
488Q10990    490   CDT2_SCHPO Cell division cycle protein cdt2 O...950.85     35.4     29     47GO:0005634; C:nucleus; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0000077; P:DNA damage checkpoint; IGI:PomBase.::GO:0006261; P:DNA-dependent DNA replication; IMP:PomBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0051443; P:positive regulation of ubiquitin-protein ligase activity; IMP:PomBase.::GO:0006279; P:premeiotic DNA replication; IMP:PomBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:PomBase.
489O42248    317   GBLP_DANRE Guanine nucleotide-binding protein...630.85     35.4     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IMP:ZFIN.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:2000543; P:positive regulation of gastrulation; IMP:UniProtKB.::GO:0051302; P:regulation of cell division; IMP:UniProtKB.::GO:2000114; P:regulation of establishment of cell polarity; IMP:UniProtKB.::GO:0032880; P:regulation of protein localization; IMP:UniProtKB.
490A5D7H2    797   STRN3_BOVIN Striatin-3 OS=Bos taurus (Bovine)...900.86     35.8     29     46GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
491Q9C4Z6    326   GPLPB_ARATH Guanine nucleotide-binding protei...450.86     35.4     38     53GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
492P50082    593   AMA1_YEAST Meiosis-specific APC/C activator p...2340.86     35.8     22     41GO:0005680; C:anaphase-promoting complex; IPI:SGD.
GO:0008047; F:enzyme activator activity; IMP:SGD.
GO:0030476; P:ascospore wall assembly; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007127; P:meiosis I; IMP:SGD.::GO:0045732; P:positive regulation of protein catabolic process; IMP:SGD.
493Q9ERG2    796   STRN3_MOUSE Striatin-3 OS=Mus musculus (Mouse...320.87     35.8     47     72
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
494P58405    794   STRN3_RAT Striatin-3 OS=Rattus norvegicus (Ra...900.89     35.8     29     46GO:0030425; C:dendrite; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IDA:RGD.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IMP:RGD.::GO:0032355; P:response to estradiol stimulus; IDA:RGD.
495Q7QJ33    428   WDR12_ANOGA Ribosome biogenesis protein WDR12...970.91     35.4     27     41GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
496B4QHG6    411   LIS1_DROSI Lissencephaly-1 homolog OS=Drosoph...960.92     35.4     26     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
497B4HSL3    411   LIS1_DROSE Lissencephaly-1 homolog OS=Drosoph...960.92     35.4     26     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
498Q7KNS3    411   LIS1_DROME Lissencephaly-1 homolog OS=Drosoph...960.92     35.4     26     43GO:0030424; C:axon; IDA:UniProtKB.::GO:0005938; C:cell cortex; IDA:FlyBase.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005869; C:dynactin complex; IDA:FlyBase.::GO:0030286; C:dynein complex; IDA:FlyBase.::GO:0005828; C:kinetochore microtubule; IDA:FlyBase.::GO:0043025; C:neuronal cell body; IDA:UniProtKB.::GO:0031616; C:spindle pole centrosome; IDA:FlyBase.
GO:0045502; F:dynein binding; ISS:UniProtKB.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051299; P:centrosome separation; IMP:FlyBase.::GO:0030381; P:chorion-containing eggshell pattern formation; IMP:UniProtKB.::GO:0007303; P:cytoplasmic transport, nurse cell to oocyte; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0046843; P:dorsal appendage formation; IMP:UniProtKB.::GO:0048142; P:germarium-derived cystoblast division; IMP:UniProtKB.::GO:0007294; P:germarium-derived oocyte fate determination; IMP:UniProtKB.::GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0006886; P:intracellular protein transport; IMP:FlyBase.::GO:0051383; P:kinetochore organization; IMP:FlyBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; IMP:FlyBase.::GO:0016319; P:mushroom body development; IMP:UniProtKB.::GO:0007405; P:neuroblast proliferation; IMP:UniProtKB.::GO:0030473; P:nuclear migration along microtubule; IGI:FlyBase.::GO:0007312; P:oocyte nucleus migration involved in oocyte dorsal/ventral axis specification; IMP:FlyBase.::GO:0030723; P:ovarian fusome organization; IMP:UniProtKB.::GO:0030510; P:regulation of BMP signaling pathway; IDA:FlyBase.::GO:0048814; P:regulation of dendrite morphogenesis; IMP:FlyBase.::GO:0043143; P:regulation of translation by machinery localization; IMP:UniProtKB.::GO:0051225; P:spindle assembly; IMP:FlyBase.::GO:0019827; P:stem cell maintenance; IDA:FlyBase.
499Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...660.92     35.8     32     47
500P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...680.93     35.4     29     50
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
501A2QPW4    412   CIAO1_ASPNC Probable cytosolic iron-sulfur pr...340.93     35.4     47     65
502Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...830.94     35.4     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
503Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...1260.95     35.4     22     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
504Q0USG2    443   CIAO1_PHANO Probable cytosolic iron-sulfur pr...1770.95     35.4     23     41
505Q13216    396   ERCC8_HUMAN DNA excision repair protein ERCC-...2290.95     35.4     19     41GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000109; C:nucleotide-excision repair complex; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
506Q66HC9    619   DNAI2_RAT Dynein intermediate chain 2, axonem...1050.95     35.4     25     43GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
507P38163    1010   SRO77_YEAST Lethal(2) giant larvae protein ho...920.95     35.8     25     49GO:0005886; C:plasma membrane; IPI:SGD.
GO:0006887; P:exocytosis; IGI:SGD.::GO:0006893; P:Golgi to plasma membrane transport; IGI:SGD.
508Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...660.95     35.4     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
509Q32NR9    708   FRITZ_XENLA WD repeat-containing and planar c...1100.96     35.4     22     46GO:0035085; C:cilium axoneme; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0060031; P:mediolateral intercalation; IMP:UniProtKB.::GO:0016476; P:regulation of embryonic cell shape; IMP:UniProtKB.::GO:0032880; P:regulation of protein localization; IMP:UniProtKB.::GO:0032185; P:septin cytoskeleton organization; IMP:UniProtKB.
510B4MY65    409   LIS1_DROWI Lissencephaly-1 homolog OS=Drosoph...960.97     35.4     26     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
511Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...2060.97     35.4     23     41
records
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