Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361P63004    410   LIS1_RAT Platelet-activating factor acetylhyd...700.34     36.6     27     53GO:0033267; C:axon part; IDA:RGD.::GO:0005829; C:cytosol; IDA:RGD.::GO:0030426; C:growth cone; IDA:RGD.::GO:0005871; C:kinesin complex; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:RGD.::GO:0042598; C:vesicular fraction; IDA:RGD.
GO:0045505; F:dynein intermediate chain binding; IDA:RGD.::GO:0047179; F:platelet-activating factor acetyltransferase activity; TAS:RGD.
GO:0021895; P:cerebral cortex neuron differentiation; IMP:RGD.::GO:0051660; P:establishment of centrosome localization; IMP:RGD.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010977; P:negative regulation of neuron projection development; IMP:RGD.::GO:0001764; P:neuron migration; IMP:RGD.::GO:0007097; P:nuclear migration; IMP:RGD.::GO:0045773; P:positive regulation of axon extension; IMP:RGD.::GO:0045931; P:positive regulation of mitotic cell cycle; IMP:RGD.::GO:0017145; P:stem cell division; IMP:RGD.
362P63005    410   LIS1_MOUSE Platelet-activating factor acetylh...700.34     36.6     27     53GO:0005813; C:centrosome; IDA:MGI.::GO:0031512; C:motile primary cilium; IDA:MGI.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IDA:MGI.
GO:0008017; F:microtubule binding; IDA:MGI.::GO:0051219; F:phosphoprotein binding; IPI:MGI.::GO:0042803; F:protein homodimerization activity; IPI:MGI.
GO:0001675; P:acrosome assembly; IMP:MGI.::GO:0030036; P:actin cytoskeleton organization; IMP:MGI.::GO:0008344; P:adult locomotory behavior; IMP:MGI.::GO:0021766; P:hippocampus development; IMP:MGI.::GO:0021819; P:layer formation in cerebral cortex; IGI:MGI.::GO:0007611; P:learning or memory; IMP:MGI.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007405; P:neuroblast proliferation; IMP:MGI.::GO:0050885; P:neuromuscular process controlling balance; IMP:MGI.::GO:0001764; P:neuron migration; IMP:MGI.::GO:0051081; P:nuclear envelope disassembly; IMP:MGI.::GO:0032319; P:regulation of Rho GTPase activity; IMP:MGI.::GO:0008090; P:retrograde axon cargo transport; IDA:MGI.::GO:0007268; P:synaptic transmission; IMP:MGI.
363B0LSW3    410   LIS1_FELCA Platelet-activating factor acetylh...700.34     36.6     27     53GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
364P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...820.34     36.6     30     50GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
365Q5IS43    410   LIS1_PANTR Platelet-activating factor acetylh...700.35     36.6     27     53GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
366Q4RJN5    410   LIS1_TETNG Lissencephaly-1 homolog OS=nigrovi...710.35     36.6     25     55GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
367Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...830.35     37     34     54GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
368C5DJV1    1290   RTC1_LACTC Restriction of telomere capping pr...650.35     37     32     58GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
369Q6NWH1    508   DCA10_DANRE DDB1- and CUL4-associated factor ...720.35     37     33     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
370Q6CKX3    347   EIF3I_KLULA Eukaryotic translation initiation...1090.36     36.6     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
371Q54NI1    837   APC4_DICDI Anaphase-promoting complex subunit...490.37     37     33     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
372Q5FVB6    396   WDR4_XENTR tRNA (guanine-N(7)-)-methyltransfe...750.38     36.6     29     49GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
373Q8SRK1    384   HAT2_ENCCU Histone acetyltransferase type B s...760.38     36.6     36     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
374Q54D08    304   LST8_DICDI Protein LST8 homolog OS=Dictyostel...1000.38     36.6     28     44GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0031932; C:TORC2 complex; IPI:dictyBase.
GO:0007190; P:activation of adenylate cyclase activity; IMP:dictyBase.::GO:0032148; P:activation of protein kinase B activity; IMP:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0030838; P:positive regulation of actin filament polymerization; IMP:dictyBase.::GO:0043520; P:regulation of myosin II filament assembly; IMP:dictyBase.
375Q91854    518   TRCB_XENLA Beta-TrCP OS=Xenopus laevis (Afric...560.38     36.6     38     59
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
376Q9W7F2    607   WDR1A_XENLA WD repeat-containing protein 1-A ...790.39     36.6     29     49GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; IDA:UniProtKB.
377Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...2110.39     36.6     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
378Q5REE6    423   WDR12_PONAB Ribosome biogenesis protein WDR12...860.39     36.6     29     49GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
379Q9GZL7    423   WDR12_HUMAN Ribosome biogenesis protein WDR12...860.39     36.6     29     49GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; IMP:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.
380P42935    788   ELP2_YEAST Elongator complex protein 2 OS=Sac...2380.39     37     24     38GO:0005737; C:cytoplasm; IDA:SGD.::GO:0033588; C:Elongator holoenzyme complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0032447; P:protein urmylation; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
381Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...670.4     36.6     28     49
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
382Q54DS4    1823   Y2056_DICDI WD repeat-containing protein DDB_...540.41     37     35     52
383C3XVT5    406   LIS1_BRAFL Lissencephaly-1 homolog OS=Branchi...2820.42     36.6     18     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
384A2AC93    623   DNAI2_MOUSE Dynein intermediate chain 2, axon...1050.42     36.6     25     44GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.
385F4I1S7    838   ELP2_ARATH Elongator complex protein 2 OS=Ara...850.42     36.6     32     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033588; C:Elongator holoenzyme complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0031538; P:negative regulation of anthocyanin metabolic process; IMP:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0031349; P:positive regulation of defense response; IMP:UniProtKB.::GO:2000024; P:regulation of leaf development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
386P25387    318   GBLP_CHLRE Guanine nucleotide-binding protein...630.43     36.2     30     54
387O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...650.43     36.6     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
388Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...1360.44     36.2     24     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
389A2RRH5    827   WDR27_HUMAN WD repeat-containing protein 27 O...700.45     36.6     29     50
390Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...850.45     36.6     28     47GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
391Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...1500.46     36.6     25     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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