Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P78406    368   RAE1L_HUMAN mRNA export factor OS=Homo sapien...1070.00007     48.1     32     49GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005856; C:cytoskeleton; TAS:ProtInc.::GO:0005640; C:nuclear outer membrane; TAS:ProtInc.::GO:0005643; C:nuclear pore; TAS:ProtInc.
GO:0008017; F:microtubule binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:ProtInc.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
32Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...700.00008     48.1     36     54GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
33Q5XII5    532   WAP53_RAT Telomerase Cajal body protein 1 OS=...1730.00008     48.5     27     40GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005697; C:telomerase holoenzyme complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0051973; P:positive regulation of telomerase activity; ISS:UniProtKB.::GO:0032203; P:telomere formation via telomerase; ISS:UniProtKB.
34Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...700.00009     47.8     36     54GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
35Q32PJ6    339   CIAO1_BOVIN Probable cytosolic iron-sulfur pr...700.00009     47.8     36     54GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
36Q8VC51    532   WAP53_MOUSE Telomerase Cajal body protein 1 O...1730.00009     48.1     26     40GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005697; C:telomerase holoenzyme complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0051973; P:positive regulation of telomerase activity; ISS:UniProtKB.::GO:0032203; P:telomere formation via telomerase; ISS:UniProtKB.
37Q9UT85    507   YIPC_SCHPO Uncharacterized WD repeat-containi...2850.00009     48.1     22     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:PomBase.
38O76071    339   CIAO1_HUMAN Probable cytosolic iron-sulfur pr...700.0001     47.8     36     54GO:0071817; C:MMXD complex; IDA:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; IGI:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
39Q4PHV3    587   IPI3_USTMA Pre-rRNA-processing protein IPI3 O...850.0001     47.8     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
40Q8C5V5    780   WDR27_MOUSE WD repeat-containing protein 27 O...910.0001     47.8     30     51
41Q5E9A4    368   RAE1L_BOVIN mRNA export factor OS=Bos taurus ...1070.0001     47.4     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
42Q3SWS8    368   RAE1L_RAT mRNA export factor OS=Rattus norveg...1070.0001     47.4     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
43A5E6M3    1163   RTC1_LODEL Restriction of telomere capping pr...1330.0001     47.8     24     48GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
44Q04199    468   CAC2_YEAST Chromatin assembly factor 1 subuni...440.0001     47.4     50     64GO:0033186; C:CAF-1 complex; IDA:SGD.::GO:0000775; C:chromosome, centromeric region; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006335; P:DNA replication-dependent nucleosome assembly; IDA:SGD.
45B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...710.0002     47     34     54
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
46A5GFN6    368   RAEL1_PIG mRNA export factor OS=Sus scrofa (P...1070.0002     47     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
47Q8C570    368   RAE1L_MOUSE mRNA export factor OS=Mus musculu...1070.0002     47     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.
48Q86VZ2    330   WDR5B_HUMAN WD repeat-containing protein 5B O...3170.0002     46.6     23     43
49A2CEH0    490   POC1B_DANRE POC1 centriolar protein homolog B...3100.0002     47     21     41
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0060287; P:epithelial cilium movement involved in determination of left/right asymmetry; IMP:ZFIN.::GO:0003014; P:renal system process; IMP:ZFIN.
50P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...1320.0002     46.6     29     47
51P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...1320.0002     46.6     29     47
52Q5FVA9    368   RAE1L_XENTR mRNA export factor OS=Xenopus tro...1070.0003     46.6     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
53C4YN69    1088   RTC1_CANAW Restriction of telomere capping pr...1060.0003     47     30     50GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
54Q5ACL4    1088   RTC1_CANAL Restriction of telomere capping pr...1060.0003     47     30     50GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
55Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...1600.0003     46.6     24     45
56C5MIB1    1110   RTC1_CANTT Restriction of telomere capping pr...1030.0004     46.6     30     48GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
57Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...2230.0004     45.8     24     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
58Q9H7D7    661   WDR26_HUMAN WD repeat-containing protein 26 O...3160.0004     46.2     19     35GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.
59Q09589    935   HIRA_CAEEL Protein HIRA homolog OS=Caenorhabd...3440.0004     46.2     19     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
60Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...960.0005     45.8     30     46GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
61Q60525    538   WAP53_MESAU Telomerase Cajal body protein 1 O...1730.0005     45.8     25     40GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005697; C:telomerase holoenzyme complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0051973; P:positive regulation of telomerase activity; ISS:UniProtKB.::GO:0032203; P:telomere formation via telomerase; ISS:UniProtKB.
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