Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301Q6NRT3    513   SMU1_XENLA WD40 repeat-containing protein SMU...2030.22     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
302Q9EPV5    1249   APAF_RAT Apoptotic protease-activating factor...730.23     37.7     30     55GO:0043293; C:apoptosome; IDA:RGD.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0042802; F:identical protein binding; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0007420; P:brain development; IEP:RGD.::GO:0010659; P:cardiac muscle cell apoptotic process; IMP:RGD.::GO:0030154; P:cell differentiation; IEP:RGD.::GO:0071560; P:cellular response to transforming growth factor beta stimulus; IDA:RGD.::GO:0006952; P:defense response; IEA:InterPro.::GO:0034349; P:glial cell apoptotic process; IEP:RGD.::GO:0006917; P:induction of apoptosis; IDA:RGD.::GO:0051260; P:protein homooligomerization; IDA:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0007584; P:response to nutrient; IEP:RGD.
303O43815    780   STRN_HUMAN Striatin OS=Homo sapiens (Human). ...500.23     37.4     38     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; ISS:UniProtKB.::GO:0005923; C:tight junction; IDA:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; ISS:UniProtKB.::GO:0030331; F:estrogen receptor binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
GO:0016358; P:dendrite development; ISS:UniProtKB.::GO:0007626; P:locomotory behavior; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0070830; P:tight junction assembly; NAS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
304Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...750.23     37.4     31     47
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
305Q7T394    410   LIS1A_DANRE Lissencephaly-1 homolog A OS=Dani...710.23     37.4     27     54GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
306Q9GZS0    605   DNAI2_HUMAN Dynein intermediate chain 2, axon...1060.23     37.4     27     45GO:0005858; C:axonemal dynein complex; IMP:MGI.::GO:0035085; C:cilium axoneme; IMP:MGI.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003777; F:microtubule motor activity; IMP:MGI.
GO:0042384; P:cilium assembly; IMP:MGI.
307Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...690.24     37.4     33     49GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
308Q06078    939   UTP21_YEAST U3 small nucleolar RNA-associated...710.24     37.4     30     52GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042274; P:ribosomal small subunit biogenesis; IC:SGD.::GO:0006364; P:rRNA processing; IGI:SGD.
309Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...2110.24     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
310Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...2110.24     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
311Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...2110.24     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
312Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...2110.24     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
313O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...860.24     37.4     24     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
314P49178    380   GBB_MAIZE Guanine nucleotide-binding protein ...750.24     37.4     31     47
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
315P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...930.24     37     28     52GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
316A0DB19    403   LIS11_PARTE Lissencephaly-1 homolog 1 OS=Para...710.25     37.4     25     49GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
317Q99M63    513   SMU1_RAT WD40 repeat-containing protein SMU1 ...2110.25     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
318Q4X0M4    1263   SEC31_ASPFU Protein transport protein sec31 O...2730.25     37.7     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
319Q0VC24    423   WDR12_BOVIN Ribosome biogenesis protein WDR12...860.25     37.4     29     49GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
320B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...390.26     37     44     62
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
321P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....500.26     37.4     38     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
322O55106    780   STRN_MOUSE Striatin OS=Mus musculus (Mouse). ...500.26     37.4     38     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
323Q8TBZ3    569   WDR20_HUMAN WD repeat-containing protein 20 O...700.26     37.4     27     51
324Q04225    511   RRB1_YEAST Ribosome assembly protein RRB1 OS=...700.26     37.4     36     49GO:0005730; C:nucleolus; IDA:SGD.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
325Q6GPP0    622   WDR70_XENLA WD repeat-containing protein 70 O...900.26     37.4     27     44
326Q93794    587   SEL10_CAEEL F-box/WD repeat-containing protei...1030.27     37.4     31     45GO:0030424; C:axon; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0046660; P:female sex differentiation; IMP:UniProtKB.::GO:0045746; P:negative regulation of Notch signaling pathway; IGI:UniProtKB.
327Q9HC35    981   EMAL4_HUMAN Echinoderm microtubule-associated...790.27     37.4     28     53GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0007017; P:microtubule-based process; NAS:UniProtKB.::GO:0007067; P:mitosis; NAS:UniProtKB.
328A5DXE2    304   SEC13_LODEL Protein transport protein SEC13 O...1320.27     37     24     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
329Q08274    665   DMWD_MOUSE Dystrophia myotonica WD repeat-con...800.27     37.4     26     49
330Q9W1J3    655   GAD1_DROME Gastrulation defective protein 1 h...1030.28     37.4     32     48
331P43033    410   LIS1_BOVIN Platelet-activating factor acetylh...720.28     37     28     53GO:0005829; C:cytosol; IDA:BHF-UCL.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0034452; F:dynactin binding; IDA:BHF-UCL.::GO:0045502; F:dynein binding; IDA:BHF-UCL.::GO:0008201; F:heparin binding; IDA:BHF-UCL.::GO:0008017; F:microtubule binding; IDA:MGI.::GO:0043274; F:phospholipase binding; IDA:BHF-UCL.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0046469; P:platelet activating factor metabolic process; IDA:BHF-UCL.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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