Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...660.15     38.1     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
272Q9VUI3    1076   EMAL_DROME Echinoderm microtubule-associated ...1870.15     38.1     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0071683; C:sensory dendrite; IDA:FlyBase.
GO:0008017; F:microtubule binding; IDA:FlyBase.
GO:0008344; P:adult locomotory behavior; IMP:FlyBase.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0007605; P:sensory perception of sound; IMP:FlyBase.
273Q54PE0    922   PWP2_DICDI Periodic tryptophan protein 2 homo...2150.15     38.1     20     41GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0030515; F:snoRNA binding; ISS:dictyBase.
GO:0006364; P:rRNA processing; ISS:dictyBase.
274Q4WEI5    436   HAT2_ASPFU Histone acetyltransferase type B s...750.15     37.7     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
275Q93454    373   NPP17_CAEEL Nucleoporin-17 OS=Caenorhabditis ...2500.15     37.7     22     37GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
276Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...1080.15     38.1     28     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
277Q8BGZ3    453   DCA12_MOUSE DDB1- and CUL4-associated factor ...740.16     37.7     34     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
278Q4V7A0    305   WDR61_RAT WD repeat-containing protein 61 OS=...890.17     37.4     27     51GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
279O43684    328   BUB3_HUMAN Mitotic checkpoint protein BUB3 OS...510.17     37.7     33     53GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0008608; P:attachment of spindle microtubules to kinetochore; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
280O14435    359   GBB_CRYPA Guanine nucleotide-binding protein ...750.17     37.7     31     51
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
281Q9WVA3    326   BUB3_MOUSE Mitotic checkpoint protein BUB3 OS...510.17     37.4     33     53GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:MGI.::GO:0051983; P:regulation of chromosome segregation; IDA:UniProtKB.::GO:0071173; P:spindle assembly checkpoint; IDA:UniProtKB.
282Q1JQB2    326   BUB3_BOVIN Mitotic checkpoint protein BUB3 OS...510.17     37.4     33     53GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0051983; P:regulation of chromosome segregation; ISS:UniProtKB.::GO:0071173; P:spindle assembly checkpoint; ISS:UniProtKB.
283Q54KL5    335   WDR5_DICDI WD repeat-containing protein 5 hom...1350.18     37.4     27     50GO:0035097; C:histone methyltransferase complex; ISS:dictyBase.
GO:0042393; F:histone binding; ISS:dictyBase.
GO:0051568; P:histone H3-K4 methylation; ISS:dictyBase.
284O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...620.19     37.7     32     53GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
285O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...730.19     37.7     30     56GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
286P40362    594   UTP18_YEAST U3 small nucleolar RNA-associated...1020.19     37.7     31     47GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
287Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...2020.2     37.7     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
288B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...1850.2     37.4     23     39
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
289Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...980.2     37.7     27     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
290B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...850.2     37.7     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
291Q32KQ2    358   WDR53_BOVIN WD repeat-containing protein 53 O...780.2     37.4     26     45
292Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...2150.21     37.4     20     37GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
293Q55AR8    355   SNR40_DICDI U5 small nuclear ribonucleoprotei...2980.21     37.4     20     39GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:dictyBase.
294A2R3Z3    657   MDV1_ASPNC Mitochondrial division protein 1 O...1060.21     37.7     29     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
295Q3UMY5    988   EMAL4_MOUSE Echinoderm microtubule-associated...790.21     37.7     28     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
296B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...720.21     37.7     29     47
297B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...720.21     37.7     29     47
298Q8C092    801   TAF5_MOUSE Transcription initiation factor TF...690.22     37.7     25     48GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
299Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...1420.22     37.7     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
300Q4P9P9    453   LIS1_USTMA Nuclear distribution protein PAC1 ...770.22     37.4     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
301Q6NRT3    513   SMU1_XENLA WD40 repeat-containing protein SMU...2030.22     37.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
records
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