Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241O17468    1047   HIRA_DROME Protein HIRA homolog OS=Drosophila...690.094     38.9     35     51GO:0001673; C:male germ cell nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.
GO:0006336; P:DNA replication-independent nucleosome assembly; IMP:FlyBase.::GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
242Q9AV81    527   PUB72_ORYSJ U-box domain-containing protein 7...720.095     38.5     28     50GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
243Q9Y1C1    664   EMAP_LYTVA 77 kDa echinoderm microtubule-asso...720.097     38.9     32     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
244Q5ZJH5    305   WDR61_CHICK WD repeat-containing protein 61 O...780.099     38.1     31     51GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
245Q5F3R7    427   DCA12_CHICK DDB1- and CUL4-associated factor ...750.1     38.5     33     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
246Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...870.1     38.1     26     49
247Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...1010.1     38.5     29     47GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
248Q4R3J7    453   DCA12_MACFA DDB1- and CUL4-associated factor ...740.1     38.5     34     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
249Q6C953    426   IPI3_YARLI Pre-rRNA-processing protein IPI3 O...850.11     38.5     29     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
250Q96RY7    1462   IF140_HUMAN Intraflagellar transport protein ...870.11     38.9     29     44
251Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...2410.11     38.5     19     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
252Q6FJ73    337   CIAO1_CANGA Probable cytosolic iron-sulfur pr...980.11     38.1     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
253P42841    465   PFS2_YEAST Polyadenylation factor subunit 2 O...790.11     38.5     28     57GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
254O00423    815   EMAL1_HUMAN Echinoderm microtubule-associated...690.11     38.5     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0005509; F:calcium ion binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.
255Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...2130.11     38.5     20     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
256Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...2020.12     38.1     20     40GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
257Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...530.12     38.1     30     57
GO:0051297; P:centrosome organization; IMP:FlyBase.
258A0CH87    403   LIS12_PARTE Lissencephaly-1 homolog 2 OS=Para...710.12     38.1     27     49GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
259Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...660.12     38.5     30     52GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
260Q5T6F0    453   DCA12_HUMAN DDB1- and CUL4-associated factor ...740.12     38.1     34     53GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
261Q4V8C3    814   EMAL1_RAT Echinoderm microtubule-associated p...690.12     38.5     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
262Q3MHH0    453   DCA12_BOVIN DDB1- and CUL4-associated factor ...740.12     38.1     34     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
263Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...660.13     38.1     32     50GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
264Q13685    434   AAMP_HUMAN Angio-associated migratory cell pr...840.13     38.1     32     45GO:0009986; C:cell surface; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008201; F:heparin binding; TAS:ProtInc.
GO:0001525; P:angiogenesis; NAS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0010595; P:positive regulation of endothelial cell migration; ISS:UniProtKB.::GO:0014909; P:smooth muscle cell migration; IEP:UniProtKB.
265Q05BC3    814   EMAL1_MOUSE Echinoderm microtubule-associated...690.13     38.5     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
266Q86H45    901   ELP2_DICDI Probable elongator complex protein...680.13     38.5     28     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008023; C:transcription elongation factor complex; ISS:dictyBase.
GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
267P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...2130.14     38.1     24     40GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
268P53197    566   CDH1_YEAST APC/C activator protein CDH1 OS=Sa...2410.14     38.1     23     41GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0010997; F:anaphase-promoting complex binding; IDA:SGD.::GO:0030332; F:cyclin binding; IDA:SGD.::GO:0097027; F:ubiquitin-protein ligase activator activity; IDA:SGD.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010697; P:negative regulation of spindle pole body separation; IMP:SGD.::GO:2000600; P:positive regulation of cyclin catabolic process; IDA:SGD.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0008361; P:regulation of cell size; IMP:SGD.
269Q8TEQ6    1508   GEMI5_HUMAN Gem-associated protein 5 OS=Homo ...820.14     38.5     32     52GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017069; F:snRNA binding; IDA:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0006461; P:protein complex assembly; TAS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; TAS:UniProtKB.
270Q5RCG7    434   AAMP_PONAB Angio-associated migratory cell pr...840.14     38.1     32     45GO:0009986; C:cell surface; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0010595; P:positive regulation of endothelial cell migration; ISS:UniProtKB.::GO:0014909; P:smooth muscle cell migration; ISS:UniProtKB.
271Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...660.15     38.1     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
records
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