Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YAR003W
Length:
426
Number of sequences:
5887
Description:
YAR003W SWD1 SGDID:S000000064, Chr I from 155005-156285, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211P41838    352   RAE1_SCHPO Poly(A)+ RNA export protein OS=Sch...710.06     38.9     35     54GO:0055126; C:Nup82 complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:PomBase.::GO:0006606; P:protein import into nucleus; TAS:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
212Q6CGP9    532   PFS2_YARLI Polyadenylation factor subunit 2 O...3450.06     39.3     19     34GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
213Q8CFD5    397   ERCC8_MOUSE DNA excision repair protein ERCC-...3360.061     39.3     20     39
GO:0009411; P:response to UV; IMP:MGI.::GO:0010165; P:response to X-ray; IMP:MGI.
214A1C6X5    1276   SEC31_ASPCL Protein transport protein sec31 O...2730.062     39.7     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
215Q9C0J8    1336   WDR33_HUMAN pre-mRNA 3' end processing protei...1060.063     39.7     24     46GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; NAS:UniProtKB.
216Q5QJC0    388   ATG21_PICAN Autophagy-related protein 21 OS=P...1070.066     38.9     31     42GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
217Q5FWQ6    415   WDR69_XENLA Outer row dynein assembly protein...2180.067     38.9     21     38GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
218Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...2160.067     38.9     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
219Q09406    534   A16L2_CAEEL Autophagic-related protein 16.2 O...660.07     39.3     32     50
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0071688; P:striated muscle myosin thick filament assembly; IMP:WormBase.
220Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...1010.07     38.9     27     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
221B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...1010.07     38.9     27     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
222Q5UPS2    527   YL783_MIMIV Putative BTB/POZ domain and WD-re...1370.07     38.9     24     52
223O24467    475   LE14B_PRUAR LEC14B homolog OS=Prunus armeniac...880.07     38.9     24     45
224Q8W1K8    370   MUT11_CHLRE Protein Mut11 OS=Chlamydomonas re...710.071     38.9     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
225Q38942    349   RAE1L_ARATH Rae1-like protein At1g80670 OS=Ar...1810.072     38.9     22     36GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005635; C:nuclear envelope; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
226Q7RZI0    1035   HIR1_NEUCR Protein hir-1 OS=1257 / FGSC 987)....990.072     39.3     27     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
227B7FNU7    439   LIS1_PHATC Lissencephaly-1 homolog OS=Phaeoda...710.074     38.9     28     49GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
228Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...2020.078     38.9     20     40GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
229O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...700.078     38.9     33     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
230Q3UGF1    1341   WDR19_MOUSE WD repeat-containing protein 19 O...710.079     39.3     35     52GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.::GO:0031514; C:motile cilium; IDA:UniProtKB.::GO:0032391; C:photoreceptor connecting cilium; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
231Q499N3    431   WDR18_RAT WD repeat-containing protein 18 OS=...860.08     38.9     26     51
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
232O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...1010.082     38.9     30     50GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
233Q08BB3    482   DCA12_DANRE DDB1- and CUL4-associated factor ...820.082     38.9     30     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
234Q8YRI1    1526   YY46_NOSS1 Uncharacterized WD repeat-containi...2360.083     39.3     19     42
235Q4VBE8    431   WDR18_MOUSE WD repeat-containing protein 18 O...610.083     38.9     31     56
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
236Q5TTP0    1059   WDY_ANOGA WD repeat-containing protein on Y c...700.085     38.9     34     50
GO:0005509; F:calcium ion binding; IEA:InterPro.
237Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...690.087     38.5     33     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
238Q3SZD4    432   WDR18_BOVIN WD repeat-containing protein 18 O...860.09     38.5     26     51
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
239Q6DIF4    607   WDR1_XENTR WD repeat-containing protein 1 OS=...790.091     38.9     30     51GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
240Q23256    501   YH92_CAEEL Uncharacterized WD repeat-containi...3100.094     38.5     20     39
241O17468    1047   HIRA_DROME Protein HIRA homolog OS=Drosophila...690.094     38.9     35     51GO:0001673; C:male germ cell nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.
GO:0006336; P:DNA replication-independent nucleosome assembly; IMP:FlyBase.::GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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