UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YAR002W

Length:

539

Number of sequences:

5887

Description:

YAR002W NUP60 SGDID:S000000063, Chr I from 152257-153876, Genome Release 64-1-1, Verified ORF, "Subunit of the nuclear pore complex (NPC), functions to anchor Nup2p to the NPC in a process controlled by the nucleoplasmic concentration of Gsp1p-GTP; involved in nuclear export and cytoplasmic localization of specific mRNAs such as ASH1"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P39705	539	NUP60_YEAST Nucleoporin NUP60 OS=Saccharomyce...	539	0	1078	100	100	GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
									GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017056; F:structural constituent of nuclear pore; TAS:SGD.
									GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0008298; P:intracellular mRNA localization; IMP:SGD.::GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0060188; P:regulation of protein desumoylation; IGI:SGD.::GO:0034398; P:telomere tethering at nuclear periphery; IMP:SGD.
2	O74500	736	NUP60_SCHPO Nucleoporin nup60 OS=Schizosaccha...	30	0.001	45.4	67	80	GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:PomBase.
									GO:0017056; F:structural constituent of nuclear pore; ISS:PomBase.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; ISS:PomBase.
3	Q8JVC2	1117	RDRP_PCVC RNA-directed RNA polymerase OS=Peni...	108	1.4	35.4	31	43
									GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
									GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
4	Q0KEP0	294	Y381_CUPNH UPF0042 nucleotide-binding protein...	100	3	33.9	23	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
5	Q14686	2063	NCOA6_HUMAN Nuclear receptor coactivator 6 OS...	136	3.4	34.3	27	45	GO:0005667; C:transcription factor complex; TAS:UniProtKB.
									GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0030331; F:estrogen receptor binding; TAS:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IPI:UniProtKB.::GO:0046965; F:retinoid X receptor binding; TAS:UniProtKB.::GO:0046966; F:thyroid hormone receptor binding; IDA:UniProtKB.
									GO:0007420; P:brain development; ISS:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0006310; P:DNA recombination; NAS:UniProtKB.::GO:0006281; P:DNA repair; NAS:UniProtKB.::GO:0006260; P:DNA replication; NAS:UniProtKB.::GO:0042921; P:glucocorticoid receptor signaling pathway; NAS:UniProtKB.::GO:0007507; P:heart development; ISS:UniProtKB.::GO:0030520; P:intracellular estrogen receptor signaling pathway; NAS:UniProtKB.::GO:0030099; P:myeloid cell differentiation; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0009725; P:response to hormone stimulus; TAS:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:UniProtKB.
6	Q1LRP3	296	Y297_RALME UPF0042 nucleotide-binding protein...	100	5.3	33.1	23	44
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.

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