FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

R0020C

Length:

373

Number of sequences:

5887

Description:

R0020C REP1 SGDID:S000029675, 2-micron plasmid from 3008-1887, Genome Release 64-1-1, reverse complement, Verified ORF, "Master regulator that acts in concert with Rep2p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification; autoregulates levels of its own transcript"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P03871	373	REP1_YEAST Partitioning protein REP1 OS=Sacch...	373	0	781	100	100	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0042802; F:identical protein binding; IPI:IntAct.
									GO:0030541; P:plasmid partitioning; IEA:UniProtKB-KW.
2	P13776	357	REP1_ZYGBA Trans-acting factor B OS=Zygosacch...	331	0.00000000004	67.4	21	42

									GO:0030541; P:plasmid partitioning; IEA:UniProtKB-KW.
3	P13778	410	REP1_ZYGRO Trans-acting factor B OS=Zygosacch...	376	0.000007	51.2	19	40

									GO:0030541; P:plasmid partitioning; IEA:UniProtKB-KW.
4	P13775	415	REP1_KLULC Trans-acting factor B OS=Kluyverom...	350	0.002	43.5	21	40

									GO:0030541; P:plasmid partitioning; IEA:UniProtKB-KW.
5	P13742	200	REP2_LACFM Trans-acting factor C OS=Lachancea...	81	0.003	42	31	56

									GO:0030541; P:plasmid partitioning; IEA:UniProtKB-KW.
6	O14095	279	YERC_SCHPO Thioredoxin domain-containing prot...	74	1.5	34.3	27	54	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.

									GO:0045454; P:cell redox homeostasis; IEA:InterPro.::GO:0006457; P:protein folding; ISS:PomBase.::GO:0072668; P:tubulin complex biogenesis; ISS:PomBase.
7	O14096	649	TGTL_SCHPO Queuine tRNA-ribosyltransferase-li...	74	1.5	34.7	27	54	GO:0005737; C:cytoplasm; IDA:PomBase.
									GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008479; F:queuine tRNA-ribosyltransferase activity; IEA:InterPro.
									GO:0008616; P:queuosine biosynthetic process; IEA:InterPro.
8	Q9HCJ6	419	VAT1L_HUMAN Synaptic vesicle membrane protein...	156	6	32.7	22	42
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.

9	P13777	322	REP1_ZYGBI Trans-acting factor B OS=Zygosacch...	72	8.7	32	33	51

									GO:0030541; P:plasmid partitioning; IEA:UniProtKB-KW.
10	Q80TB8	417	VAT1L_MOUSE Synaptic vesicle membrane protein...	156	8.7	32	21	41
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.

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Total records:

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