rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74970 | 612 | PRP39_SCHPO Pre-mRNA-processing factor 39 OS=... | 339 | 6e-42 | 161 | 29 | 48 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase. | 2 | Q03776 | 544 | PRP42_YEAST U1 small nuclear ribonucleoprotei... | 349 | 4e-26 | 114 | 28 | 53 | GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD. | 3 | Q1JPZ7 | 752 | PRP39_DANRE Pre-mRNA-processing factor 39 OS=... | 329 | 4e-16 | 84.7 | 25 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | Q4KLU2 | 641 | PRP39_XENLA Pre-mRNA-processing factor 39 OS=... | 312 | 7e-16 | 83.6 | 23 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 5 | Q86UA1 | 669 | PRP39_HUMAN Pre-mRNA-processing factor 39 OS=... | 373 | 7e-16 | 83.6 | 23 | 41 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 6 | P39682 | 629 | PRP39_YEAST Pre-mRNA-processing factor 39 OS=... | 257 | 0.000000000000005 | 80.9 | 25 | 44 | GO:0000243; C:commitment complex; IGI:SGD.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IGI:SGD. | 7 | Q8K2Z2 | 665 | PRP39_MOUSE Pre-mRNA-processing factor 39 OS=... | 320 | 0.00000000000004 | 78.2 | 23 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | O14233 | 733 | RNA14_SCHPO mRNA 3'-end-processing protein rn... | 335 | 0.00000000008 | 67.8 | 22 | 40 | GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:PomBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase. | 9 | P25991 | 765 | SUF_DROME Protein suppressor of forked OS=Dro... | 316 | 0.00000008 | 58.5 | 20 | 42 | GO:0005848; C:mRNA cleavage stimulating factor complex; ISS:FlyBase. | | | | | | | | | | | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:FlyBase. | 10 | Q5RDW9 | 717 | CSTF3_PONAB Cleavage stimulation factor subun... | 151 | 0.0000001 | 57.8 | 28 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 11 | Q99LI7 | 717 | CSTF3_MOUSE Cleavage stimulation factor subun... | 313 | 0.0000002 | 57 | 22 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 12 | Q12996 | 717 | CSTF3_HUMAN Cleavage stimulation factor subun... | 151 | 0.0000002 | 57 | 28 | 47 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 13 | Q7KRW8 | 1066 | PRP39_DROME Pre-mRNA-processing factor 39 OS=... | 83 | 0.000002 | 53.9 | 34 | 52 | GO:0005685; C:U1 snRNP; ISS:FlyBase. | | | | | | | | | | GO:0031072; F:heat shock protein binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 14 | Q5B3I8 | 1075 | RNA14_EMENI mRNA 3'-end-processing protein rn... | 340 | 0.0000005 | 55.8 | 22 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 15 | Q4IR09 | 997 | RNA14_GIBZE mRNA 3'-end-processing protein RN... | 346 | 0.000002 | 53.9 | 21 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 16 | Q6FW76 | 695 | CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N... | 121 | 8.5 | 32.7 | 25 | 41 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 17 | Q4WXX4 | 1029 | RNA14_ASPFU mRNA 3'-end-processing protein rn... | 303 | 0.0006 | 46.2 | 21 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 18 | Q6C8L8 | 806 | RNA14_YARLI mRNA 3'-end-processing protein RN... | 257 | 0.0007 | 45.8 | 23 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 19 | Q2UKV8 | 1078 | RNA14_ASPOR mRNA 3'-end-processing protein rn... | 306 | 0.001 | 45.4 | 21 | 36 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 20 | Q6CJK2 | 684 | CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=1... | 56 | 0.044 | 40 | 39 | 55 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 21 | P17886 | 702 | CRN_DROME Protein crooked neck OS=Drosophila ... | 131 | 1.5 | 35 | 26 | 45 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005813; C:centrosome; IDA:FlyBase.::GO:0072686; C:mitotic spindle; IDA:FlyBase.::GO:0016607; C:nuclear speck; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0008366; P:axon ensheathment; IMP:FlyBase.::GO:0051298; P:centrosome duplication; IMP:FlyBase.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0007443; P:Malpighian tubule morphogenesis; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0007438; P:oenocyte development; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 22 | Q750X3 | 683 | CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Y... | 91 | 0.002 | 43.9 | 30 | 49 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 23 | Q7S1Y0 | 1167 | RNA14_NEUCR mRNA 3'-end-processing protein rn... | 137 | 0.003 | 43.9 | 23 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 24 | P63155 | 690 | CRNL1_RAT Crooked neck-like protein 1 OS=Ratt... | 96 | 1 | 35.4 | 31 | 49 | | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 25 | P63154 | 690 | CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu... | 96 | 1 | 35.4 | 31 | 49 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 26 | Q6C186 | 676 | CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=l... | 63 | 4.1 | 33.5 | 25 | 51 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 27 | P87312 | 674 | CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=S... | 307 | 0.013 | 41.6 | 23 | 43 | GO:0005681; C:spliceosomal complex; IDA:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase. | 28 | Q6BJD8 | 740 | RNA14_DEBHA mRNA 3'-end-processing protein RN... | 349 | 0.018 | 41.2 | 18 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 29 | Q4PB37 | 781 | CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=U... | 101 | 5.8 | 33.1 | 29 | 50 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 30 | Q12309 | 687 | CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=S... | 63 | 0.15 | 38.1 | 25 | 56 | GO:0000785; C:chromatin; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000354; P:cis assembly of pre-catalytic spliceosome; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD. | 31 | Q9BZJ0 | 848 | CRNL1_HUMAN Crooked neck-like protein 1 OS=Ho... | 96 | 1.1 | 35.4 | 31 | 49 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB. |