| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74823 | 377 | YBJC_SCHPO Zinc finger CCCH domain-containing... | 287 | 1e-20 | 96.3 | 25 | 44 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 2 | Q8IXZ2 | 948 | ZC3H3_HUMAN Zinc finger CCCH domain-containin... | 162 | 9e-20 | 95.5 | 32 | 46 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB. | 3 | Q3ED78 | 470 | C3H7_ARATH Zinc finger CCCH domain-containing... | 220 | 2e-19 | 94 | 28 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 4 | Q8CHP0 | 950 | ZC3H3_MOUSE Zinc finger CCCH domain-containin... | 152 | 1e-18 | 92 | 32 | 47 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; ISS:UniProtKB. | 5 | Q6BTT1 | 223 | YTH1_DEBHA mRNA 3'-end-processing protein YTH... | 170 | 0.0000000003 | 63.5 | 33 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 6 | Q9UPT8 | 1303 | ZC3H4_HUMAN Zinc finger CCCH domain-containin... | 102 | 0.0000005 | 55.8 | 34 | 53 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 7 | Q6ZPZ3 | 1304 | ZC3H4_MOUSE Zinc finger CCCH domain-containin... | 102 | 0.000001 | 55.1 | 34 | 53 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 8 | Q758T3 | 209 | YTH1_ASHGO mRNA 3'-end-processing protein YTH... | 127 | 0.000001 | 52.4 | 32 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 9 | Q6C922 | 193 | YTH1_YARLI mRNA 3'-end-processing protein YTH... | 121 | 0.000001 | 52 | 33 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 10 | Q9JJ48 | 305 | ZC3H8_MOUSE Zinc finger CCCH domain-containin... | 123 | 0.000005 | 51.6 | 29 | 43 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; ISS:UniProtKB.::GO:0046677; P:response to antibiotic; ISS:UniProtKB.::GO:0043029; P:T cell homeostasis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 11 | Q8BYK8 | 1177 | ZC3H6_MOUSE Zinc finger CCCH domain-containin... | 82 | 0.000006 | 52.4 | 37 | 52 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 12 | Q59T36 | 215 | YTH1_CANAL mRNA 3'-end-processing protein YTH... | 113 | 0.000009 | 50.1 | 35 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD. | 13 | A6NMK7 | 179 | CPS4L_HUMAN Putative cleavage and polyadenyla... | 135 | 0.00001 | 48.9 | 30 | 44 | | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 14 | O95639 | 269 | CPSF4_HUMAN Cleavage and polyadenylation spec... | 108 | 0.002 | 43.1 | 31 | 44 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 15 | Q9LTS7 | 675 | C3H65_ARATH Zinc finger CCCH domain-containin... | 109 | 0.0001 | 48.1 | 31 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 16 | Q9UTD1 | 170 | YTH1_SCHPO mRNA 3'-end-processing protein yth... | 109 | 0.053 | 38.1 | 30 | 49 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IC:PomBase. | 17 | Q4IPA4 | 411 | YTH1_GIBZE mRNA 3'-end-processing protein YTH... | 86 | 3.2 | 33.5 | 28 | 40 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 18 | Q6CKU1 | 210 | YTH1_KLULA mRNA 3'-end-processing protein YTH... | 131 | 0.0004 | 45.1 | 31 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 19 | P61129 | 1189 | ZC3H6_HUMAN Zinc finger CCCH domain-containin... | 73 | 1 | 35.4 | 34 | 42 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 20 | Q8N5P1 | 291 | ZC3H8_HUMAN Zinc finger CCCH domain-containin... | 113 | 0.0005 | 45.4 | 28 | 47 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; IMP:UniProtKB.::GO:0046677; P:response to antibiotic; IDA:UniProtKB.::GO:0043029; P:T cell homeostasis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 21 | Q06102 | 208 | YTH1_YEAST mRNA 3'-end-processing protein YTH... | 156 | 0.0005 | 44.7 | 29 | 41 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD. | 22 | Q5BGN2 | 254 | YTH1_EMENI mRNA 3'-end-processing protein yth... | 98 | 0.23 | 37 | 29 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 23 | Q5FVR7 | 243 | CPSF4_RAT Cleavage and polyadenylation specif... | 151 | 0.003 | 42.7 | 28 | 40 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 24 | Q69NK8 | 613 | C3H59_ORYSJ Zinc finger CCCH domain-containin... | 56 | 0.003 | 43.5 | 41 | 50 | | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 25 | O19137 | 243 | CPSF4_BOVIN Cleavage and polyadenylation spec... | 108 | 0.004 | 42.4 | 31 | 44 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 26 | Q4WKD9 | 254 | YTH1_ASPFU mRNA 3'-end-processing protein yth... | 98 | 0.084 | 38.1 | 30 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 27 | P0CS64 | 332 | YTH1_CRYNJ mRNA 3'-end-processing protein YTH... | 145 | 0.006 | 42.4 | 28 | 40 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 28 | P0CS65 | 332 | YTH1_CRYNB mRNA 3'-end-processing protein YTH... | 145 | 0.006 | 42.4 | 28 | 40 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 29 | Q657B3 | 698 | C3H7_ORYSJ Zinc finger CCCH domain-containing... | 93 | 0.056 | 39.7 | 32 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | Q9UTH9 | 617 | DUS3_SCHPO tRNA-dihydrouridine(47) synthase [... | 62 | 0.007 | 42.4 | 39 | 42 | GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006400; P:tRNA modification; ISS:PomBase. | 31 | Q0DA50 | 665 | C3H45_ORYSJ Zinc finger CCCH domain-containin... | 69 | 0.11 | 38.5 | 32 | 45 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |
