rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q0DA50 | 665 | C3H45_ORYSJ Zinc finger CCCH domain-containin... | 69 | 0.11 | 38.5 | 32 | 45 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 32 | Q6FTL0 | 209 | YTH1_CANGA mRNA 3'-end-processing protein YTH... | 164 | 0.011 | 40.8 | 28 | 40 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 33 | Q4P384 | 366 | YTH1_USTMA mRNA 3'-end-processing protein YTH... | 103 | 0.013 | 41.2 | 32 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 34 | A9LNK9 | 631 | CPSF_ARATH Cleavage and polyadenylation speci... | 71 | 0.2 | 37.7 | 30 | 49 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 35 | Q0JD07 | 346 | C3H28_ORYSJ Zinc finger CCCH domain-containin... | 109 | 2.3 | 33.9 | 27 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 36 | A4IIN5 | 333 | TISD_XENTR Zinc finger protein 36, C3H1 type-... | 70 | 0.037 | 39.7 | 36 | 37 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB. | 37 | Q6DJP7 | 269 | CPSF4_XENLA Cleavage and polyadenylation spec... | 108 | 0.049 | 38.9 | 30 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 38 | Q7ZXW9 | 363 | TISDA_XENLA Zinc finger protein 36, C3H1 type... | 66 | 0.052 | 39.3 | 35 | 36 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB. | 39 | Q66KE3 | 269 | CPSF4_XENTR Cleavage and polyadenylation spec... | 108 | 0.058 | 38.9 | 30 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 40 | Q805B4 | 364 | TISDB_XENLA Zinc finger protein 36, C3H1 type... | 66 | 0.063 | 38.9 | 35 | 36 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:UniProtKB.::GO:0039020; P:pronephric nephron tubule development; IMP:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB. | 41 | Q96K80 | 434 | ZC3HA_HUMAN Zinc finger CCCH domain-containin... | 126 | 0.1 | 38.5 | 28 | 36 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 42 | Q2URI6 | 255 | YTH1_ASPOR mRNA 3'-end-processing protein yth... | 103 | 0.14 | 37.7 | 30 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 43 | Q8R205 | 435 | ZC3HA_MOUSE Zinc finger CCCH domain-containin... | 125 | 0.13 | 38.1 | 26 | 34 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 44 | P47977 | 285 | CTH2_YEAST mRNA decay factor CTH2 OS=Saccharo... | 59 | 0.16 | 37.4 | 32 | 41 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006879; P:cellular iron ion homeostasis; IMP:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:SGD. | 45 | Q28Y69 | 406 | ZC3HF_DROPS Zinc finger CCCH domain-containin... | 118 | 0.23 | 37.4 | 26 | 41 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 46 | Q7SGR2 | 317 | YTH1_NEUCR mRNA 3'-end-processing protein yth... | 99 | 0.43 | 36.2 | 29 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 47 | Q94AD9 | 404 | C3H3_ARATH Zinc finger CCCH domain-containing... | 132 | 0.49 | 36.2 | 26 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 48 | O22243 | 1015 | C3H31_ARATH Zinc finger CCCH domain-containin... | 51 | 0.52 | 36.6 | 33 | 49 | GO:0009507; C:chloroplast; IDA:TAIR. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 49 | P47979 | 404 | ZFS1_SCHPO Zinc finger protein zfs1 OS=Schizo... | 44 | 0.55 | 36.2 | 41 | 50 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0035925; F:mRNA 3'-UTR AU-rich region binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0006402; P:mRNA catabolic process; IMP:PomBase.::GO:0031030; P:negative regulation of septation initiation signaling cascade; IGI:PomBase.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IMP:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IGI:PomBase. | 50 | Q84W91 | 468 | C3H32_ARATH Zinc finger CCCH domain-containin... | 156 | 0.62 | 35.8 | 24 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 51 | Q9C9N3 | 310 | C3H14_ARATH Zinc finger CCCH domain-containin... | 63 | 0.74 | 35.4 | 33 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 52 | P59281 | 1107 | RHG39_MOUSE Rho GTPase-activating protein 39 ... | 118 | 0.81 | 35.8 | 26 | 40 | GO:0005856; C:cytoskeleton; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0007165; P:signal transduction; IEA:InterPro. | 53 | Q3ZC82 | 735 | ZC3HE_BOVIN Zinc finger CCCH domain-containin... | 128 | 0.98 | 35.4 | 28 | 35 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 54 | P47980 | 436 | TIS1_DROME Protein TIS11 OS=Drosophila melano... | 59 | 1.1 | 35 | 34 | 34 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016246; P:RNA interference; IMP:FlyBase. | 55 | Q8BQZ5 | 211 | CPSF4_MOUSE Cleavage and polyadenylation spec... | 153 | 1.3 | 34.3 | 25 | 35 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 56 | P47976 | 325 | CTH1_YEAST mRNA decay factor CTH1 OS=Saccharo... | 59 | 1.3 | 34.7 | 29 | 39 | GO:0005634; C:nucleus; IC:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006879; P:cellular iron ion homeostasis; IGI:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IGI:SGD. | 57 | Q6FJ14 | 640 | DUS3_CANGA tRNA-dihydrouridine(47) synthase [... | 68 | 3.1 | 33.9 | 31 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 58 | Q6C4K3 | 622 | DUS3_YARLI tRNA-dihydrouridine(47) synthase [... | 43 | 1.5 | 35 | 35 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 59 | Q9SD61 | 352 | C3H42_ARATH Zinc finger CCCH domain-containin... | 72 | 1.5 | 34.7 | 25 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 60 | P47974 | 494 | TISD_HUMAN Zinc finger protein 36, C3H1 type-... | 75 | 1.5 | 34.7 | 31 | 33 | | | | | | | | | | | | | | | | | | | | | | 61 | Q8GVZ8 | 496 | C3H48_ORYSJ Putative zinc finger CCCH domain-... | 111 | 1.5 | 34.7 | 28 | 41 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |