rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q9P7S3 | 425 | SSR3_SCHPO SWI/SNF and RSC complexes subunit ... | 456 | 4e-41 | 158 | 26 | 46 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.::GO:0016514; C:SWI/SNF complex; IDA:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase. | | | | | | | | | | GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase. | 2 | Q92925 | 531 | SMRD2_HUMAN SWI/SNF-related matrix-associated... | 496 | 6e-37 | 147 | 27 | 45 | GO:0016514; C:SWI/SNF complex; IDA:UniProtKB. | | | | | | | | | | GO:0003713; F:transcription coactivator activity; NAS:UniProtKB. | | | | | | | | | | GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | Q99JR8 | 531 | SMRD2_MOUSE SWI/SNF-related matrix-associated... | 498 | 5e-36 | 144 | 27 | 45 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | O54772 | 531 | SMRD2_RAT SWI/SNF-related matrix-associated a... | 498 | 1e-35 | 143 | 26 | 45 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | E1BJD1 | 531 | SMRD2_BOVIN SWI/SNF-related matrix-associated... | 496 | 9e-35 | 140 | 26 | 43 | | | | | | | | | | | | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | Q9FMT4 | 534 | SNF12_ARATH SWI/SNF complex component SNF12 h... | 482 | 1e-32 | 134 | 25 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | Q96GM5 | 515 | SMRD1_HUMAN SWI/SNF-related matrix-associated... | 435 | 1e-31 | 131 | 25 | 43 | GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB. | | | | | | | | | | GO:0032947; F:protein complex scaffold; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL. | | | | | | | | | | GO:0048096; P:chromatin-mediated maintenance of transcription; IMP:UniProtKB.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL. | 8 | Q61466 | 515 | SMRD1_MOUSE SWI/SNF-related matrix-associated... | 435 | 1e-31 | 131 | 25 | 43 | GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 9 | Q2TBN1 | 515 | SMRD1_BOVIN SWI/SNF-related matrix-associated... | 500 | 3e-31 | 130 | 24 | 42 | GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 10 | Q6P9Z1 | 483 | SMRD3_MOUSE SWI/SNF-related matrix-associated... | 496 | 2e-29 | 124 | 24 | 42 | GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0003219; P:cardiac right ventricle formation; IMP:MGI.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042692; P:muscle cell differentiation; IMP:MGI.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:MGI.::GO:0043393; P:regulation of protein binding; IDA:MGI.::GO:0003139; P:secondary heart field specification; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 11 | Q6STE5 | 483 | SMRD3_HUMAN SWI/SNF-related matrix-associated... | 496 | 2e-29 | 124 | 24 | 42 | GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0071565; C:nBAF complex; ISS:UniProtKB.::GO:0071564; C:npBAF complex; ISS:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0016514; C:SWI/SNF complex; NAS:UniProtKB. | | | | | | | | | | GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:BHF-UCL.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IMP:BHF-UCL.::GO:0035257; F:nuclear hormone receptor binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; NAS:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0006338; P:chromatin remodeling; IDA:BHF-UCL.::GO:0003407; P:neural retina development; IEP:BHF-UCL.::GO:0006337; P:nucleosome disassembly; IDA:BHF-UCL.::GO:0002052; P:positive regulation of neuroblast proliferation; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:BHF-UCL.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB. | 12 | P53628 | 566 | SNF12_YEAST Transcription regulatory protein ... | 559 | 1e-20 | 99.4 | 23 | 43 | GO:0016514; C:SWI/SNF complex; IMP:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0061412; P:positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 13 | Q556Z0 | 456 | SNF12_DICDI SWI/SNF complex component SNF12 h... | 477 | 3e-20 | 97.4 | 22 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 14 | P25632 | 483 | RSC6_YEAST Chromatin structure-remodeling com... | 466 | 0.0000000000009 | 74.3 | 24 | 41 | GO:0016586; C:RSC complex; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:SGD.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 15 | Q08747 | 228 | UAF30_YEAST Upstream activation factor subuni... | 60 | 0.039 | 39.7 | 30 | 55 | GO:0000500; C:RNA polymerase I upstream activating factor complex; IDA:SGD. | | | | | | | | | | GO:0001165; F:RNA polymerase I upstream control element sequence-specific DNA binding; IDA:SGD. | | | | | | | | | | GO:0006325; P:chromatin organization; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD. | 16 | O74503 | 233 | UAF30_SCHPO Upstream activation factor subuni... | 51 | 0.055 | 39.3 | 33 | 61 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0000500; C:RNA polymerase I upstream activating factor complex; TAS:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006360; P:transcription from RNA polymerase I promoter; TAS:PomBase. | 17 | B2FU61 | 306 | TTCA_STRMK tRNA 2-thiocytidine biosynthesis p... | 137 | 0.36 | 37 | 28 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 18 | P35942 | 1159 | RDRP_ROTGI RNA-directed RNA polymerase OS=(is... | 77 | 1.9 | 35 | 29 | 48 | GO:0019012; C:virion; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro. | 19 | Q07327 | 597 | ROP_DROME Protein ROP OS=Drosophila melanogas... | 94 | 2.1 | 35 | 29 | 47 | GO:0005829; C:cytosol; IDA:FlyBase.::GO:0016020; C:membrane; TAS:FlyBase.::GO:0000300; C:peripheral to membrane of membrane fraction; IDA:FlyBase.::GO:0043195; C:terminal button; IDA:FlyBase. | | | | | | | | | | | | | | | | | | | | GO:0000910; P:cytokinesis; IMP:FlyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0007317; P:regulation of pole plasm oskar mRNA localization; IMP:FlyBase.::GO:0009416; P:response to light stimulus; IMP:FlyBase.::GO:0016082; P:synaptic vesicle priming; NAS:FlyBase.::GO:0006904; P:vesicle docking involved in exocytosis; IEA:InterPro. |