rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74803 | 368 | RHP23_SCHPO UV excision repair protein rhp23 ... | 402 | 6e-88 | 277 | 43 | 59 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase. | | | | | | | | | | GO:0003684; F:damaged DNA binding; ISS:PomBase.::GO:0031593; F:polyubiquitin binding; TAS:PomBase. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0006289; P:nucleotide-excision repair; IMP:PomBase.::GO:0016567; P:protein ubiquitination; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; TAS:PomBase. | 2 | Q84L33 | 371 | RD23A_ARATH Putative DNA repair protein RAD23... | 411 | 1e-65 | 219 | 36 | 53 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 3 | P54728 | 416 | RD23B_MOUSE UV excision repair protein RAD23 ... | 468 | 6e-64 | 216 | 36 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI. | 4 | Q29RK4 | 408 | RD23B_BOVIN UV excision repair protein RAD23 ... | 458 | 4e-62 | 211 | 36 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 5 | Q84L32 | 368 | RD23B_ARATH Putative DNA repair protein RAD23... | 413 | 7e-59 | 202 | 37 | 53 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 6 | Q84L31 | 419 | RD23C_ARATH Putative DNA repair protein RAD23... | 51 | 3.3 | 33.5 | 35 | 47 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 7 | Q40742 | 392 | RAD23_ORYSJ Probable DNA repair protein RAD23... | 419 | 9e-58 | 199 | 36 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 8 | Q84L30 | 378 | RD23D_ARATH Putative DNA repair protein RAD23... | 419 | 3e-56 | 195 | 36 | 50 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0009409; P:response to cold; IEP:TAIR. | 9 | P32628 | 398 | RAD23_YEAST UV excision repair protein RAD23 ... | 434 | 2e-52 | 185 | 34 | 48 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000111; C:nucleotide-excision repair factor 2 complex; IDA:SGD.::GO:0000502; C:proteasome complex; IMP:SGD. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IPI:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0000715; P:nucleotide-excision repair, DNA damage recognition; TAS:SGD.::GO:0006517; P:protein deglycosylation; IDA:SGD. | 10 | Q4KMA2 | 415 | RD23B_RAT UV excision repair protein RAD23 ho... | 462 | 1e-50 | 181 | 33 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 11 | P54725 | 363 | RD23A_HUMAN UV excision repair protein RAD23 ... | 132 | 2e-22 | 100 | 48 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006289; P:nucleotide-excision repair; IDA:UniProtKB.::GO:0045070; P:positive regulation of viral genome replication; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB. | 12 | A3KMV2 | 362 | RD23A_BOVIN UV excision repair protein RAD23 ... | 132 | 3e-22 | 100 | 48 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 13 | P54726 | 363 | RD23A_MOUSE UV excision repair protein RAD23 ... | 132 | 2e-22 | 100 | 48 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 14 | P54727 | 409 | RD23B_HUMAN UV excision repair protein RAD23 ... | 134 | 2e-27 | 115 | 46 | 58 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; IDA:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0000715; P:nucleotide-excision repair, DNA damage recognition; IDA:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB. | 15 | Q54LV1 | 342 | RAD23_DICDI UV excision repair protein RAD23 ... | 75 | 0.0000000000002 | 74.3 | 44 | 67 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 16 | Q10169 | 354 | DSK2_SCHPO Deubiquitination-protection protei... | 206 | 0.000000006 | 60.8 | 28 | 48 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; IDA:PomBase. | | | | | | | | | | GO:0033554; P:cellular response to stress; NAS:PomBase.::GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0030474; P:spindle pole body duplication; ISS:PomBase. | 17 | Q4PLJ0 | 81 | NEDD8_RABIT NEDD8 OS=Oryctolagus cuniculus (R... | 61 | 0.00000002 | 55.8 | 41 | 66 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 18 | Q15843 | 81 | NEDD8_HUMAN NEDD8 OS=Homo sapiens (Human). GN... | 61 | 0.00000002 | 55.8 | 41 | 66 | GO:0005634; C:nucleus; TAS:ProtInc. | | | | | | | | | | GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB. | | | | | | | | | | GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.::GO:0045116; P:protein neddylation; IDA:MGI.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:ProtInc. | 19 | P61282 | 81 | NEDD8_BOVIN NEDD8 OS=Bos taurus (Bovine). GN=... | 61 | 0.00000002 | 55.8 | 41 | 66 | GO:0005634; C:nucleus; ISS:AgBase. | | | | | | | | | | | | | | | | | | | | GO:0008104; P:protein localization; ISS:AgBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:AgBase. | 20 | Q71UE8 | 81 | NEDD8_RAT NEDD8 OS=Rattus norvegicus (Rat). G... | 61 | 0.00000002 | 55.5 | 41 | 66 | GO:0005634; C:nucleus; IDA:RGD. | | | | | | | | | | | | | | | | | | | | GO:0045116; P:protein neddylation; IDA:RGD.::GO:0014070; P:response to organic cyclic compound; IDA:RGD. | 21 | P29595 | 81 | NEDD8_MOUSE NEDD8 OS=Mus musculus (Mouse). GN... | 61 | 0.00000002 | 55.5 | 41 | 66 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | | | | | | | | | | | GO:0008104; P:protein localization; IDA:MGI.::GO:0045116; P:protein neddylation; ISS:MGI.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI. | 22 | P48510 | 373 | DSK2_YEAST Ubiquitin domain-containing protei... | 66 | 0.00000003 | 58.5 | 42 | 62 | GO:0005635; C:nuclear envelope; IGI:GOC. | | | | | | | | | | GO:0030674; F:protein binding, bridging; IMP:SGD. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0007103; P:spindle pole body duplication in nuclear envelope; IGI:SGD. | 23 | P18101 | 128 | RL40_DROME Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000007 | 54.7 | 39 | 63 | GO:0022625; C:cytosolic large ribosomal subunit; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; TAS:FlyBase. | | | | | | | | | | GO:0006412; P:translation; TAS:FlyBase. | 24 | P0C276 | 128 | RL40_SHEEP Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 25 | P62986 | 128 | RL40_RAT Ubiquitin-60S ribosomal protein L40 ... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 26 | P0C275 | 128 | RL40_PONPY Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 27 | P63053 | 128 | RL40_PIG Ubiquitin-60S ribosomal protein L40 ... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 28 | P68205 | 128 | RL40_OPHHA Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 29 | P62984 | 128 | RL40_MOUSE Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 30 | P0C273 | 128 | RL40_MACFA Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 31 | P62987 | 128 | RL40_HUMAN Ubiquitin-60S ribosomal protein L4... | 64 | 0.00000009 | 54.7 | 39 | 63 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.::GO:0030666; C:endocytic vesicle membrane; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005886; C:plasma membrane; TAS:Reactome.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0000187; P:activation of MAPK activity; TAS:Reactome.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0006916; P:anti-apoptosis; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0006281; P:DNA repair; TAS:Reactome.::GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0000080; P:G1 phase of mitotic cell cycle; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:Reactome.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0007254; P:JNK cascade; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0007220; P:Notch receptor processing; TAS:Reactome.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0070423; P:nucleotide-binding oligomerization domain containing signaling pathway; TAS:Reactome.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0050852; P:T cell receptor signaling pathway; TAS:Reactome.::GO:0008063; P:Toll signaling pathway; TAS:Reactome.::GO:0034130; P:toll-like receptor 1 signaling pathway; TAS:Reactome.::GO:0034134; P:toll-like receptor 2 signaling pathway; TAS:Reactome.::GO:0034138; P:toll-like receptor 3 signaling pathway; TAS:Reactome.::GO:0034142; P:toll-like receptor 4 signaling pathway; TAS:Reactome.::GO:0006412; P:translation; NAS:UniProtKB.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0035666; P:TRIF-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome. |