rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q12330 | 94 | RUXE_YEAST Small nuclear ribonucleoprotein E ... | 85 | 1e-30 | 109 | 61 | 78 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005682; C:U5 snRNP; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD. | 2 | Q9USZ3 | 84 | RUXE_SCHPO Small nuclear ribonucleoprotein E ... | 89 | 2e-30 | 109 | 56 | 79 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase. | 3 | Q7ZUG0 | 92 | RUXE_DANRE Small nuclear ribonucleoprotein E ... | 95 | 3e-28 | 103 | 54 | 76 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | Q9VLV5 | 94 | RUXE_DROME Probable small nuclear ribonucleop... | 94 | 3e-26 | 98.6 | 50 | 73 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase. | 5 | P62305 | 92 | RUXE_MOUSE Small nuclear ribonucleoprotein E ... | 95 | 5e-26 | 97.8 | 51 | 73 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 6 | P62304 | 92 | RUXE_HUMAN Small nuclear ribonucleoprotein E ... | 95 | 5e-26 | 97.8 | 51 | 73 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008334; P:histone mRNA metabolic process; TAS:Reactome.::GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000245; P:spliceosomal complex assembly; NAS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 7 | P62303 | 92 | RUXE_CHICK Small nuclear ribonucleoprotein E ... | 95 | 5e-26 | 97.8 | 51 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | A4FUI2 | 92 | RUXE_BOVIN Small nuclear ribonucleoprotein E ... | 95 | 5e-26 | 97.8 | 51 | 73 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 9 | A1XQR9 | 92 | RUXE_PIG Small nuclear ribonucleoprotein E OS... | 95 | 1e-25 | 96.7 | 49 | 72 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 10 | Q9XTU6 | 90 | RUXE_CAEEL Probable small nuclear ribonucleop... | 85 | 6e-22 | 87.4 | 51 | 68 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043186; C:P granule; IDA:WormBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0032940; P:secretion by cell; IMP:WormBase. | 11 | A8XDT0 | 90 | RUXE_CAEBR Probable small nuclear ribonucleop... | 84 | 2e-21 | 85.9 | 50 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 12 | Q9VXE0 | 76 | RUXG_DROME Probable small nuclear ribonucleop... | 57 | 0.00002 | 42.7 | 35 | 67 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase. | 13 | P24715 | 81 | RUXG_MEDSA Probable small nuclear ribonucleop... | 54 | 0.00002 | 42.7 | 39 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 14 | P62309 | 76 | RUXG_MOUSE Small nuclear ribonucleoprotein G ... | 57 | 0.00003 | 42.4 | 32 | 67 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 15 | P62308 | 76 | RUXG_HUMAN Small nuclear ribonucleoprotein G ... | 57 | 0.00003 | 42.4 | 32 | 67 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008334; P:histone mRNA metabolic process; TAS:Reactome.::GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000245; P:spliceosomal complex assembly; NAS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 16 | Q3ZBL0 | 76 | RUXG_BOVIN Small nuclear ribonucleoprotein G ... | 57 | 0.00003 | 42.4 | 32 | 67 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 17 | A8MWD9 | 76 | RUXGL_HUMAN Small nuclear ribonucleoprotein G... | 57 | 0.00006 | 41.2 | 32 | 68 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 18 | O82221 | 80 | RUXG_ARATH Probable small nuclear ribonucleop... | 54 | 0.00006 | 41.2 | 33 | 69 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 19 | Q0W8R9 | 72 | RUXX_UNCMA Putative snRNP Sm-like protein OS=... | 77 | 0.0003 | 38.9 | 31 | 55 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 20 | Q54RX0 | 85 | RUXG_DICDI Probable small nuclear ribonucleop... | 77 | 0.0008 | 38.1 | 26 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 21 | Q9N4G9 | 77 | RUXG_CAEEL Probable small nuclear ribonucleop... | 52 | 0.001 | 37.7 | 38 | 65 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043186; C:P granule; IDA:WormBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 22 | Q05856 | 199 | RSMB_DROME Small nuclear ribonucleoprotein-as... | 49 | 0.002 | 38.9 | 37 | 65 | GO:0015030; C:Cajal body; IDA:FlyBase.::GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0045495; C:pole plasm; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007281; P:germ cell development; IMP:FlyBase.::GO:0008406; P:gonad development; IMP:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase. | 23 | Q10163 | 147 | RSMB_SCHPO Small nuclear ribonucleoprotein-as... | 48 | 0.002 | 38.1 | 40 | 60 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IC:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase. | 24 | P57743 | 89 | LSM3_YEAST U6 snRNA-associated Sm-like protei... | 51 | 0.002 | 37 | 31 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0005732; C:small nucleolar ribonucleoprotein complex; IPI:SGD.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005688; C:U6 snRNP; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; TAS:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 25 | Q55A45 | 274 | RSMB_DICDI Small nuclear ribonucleoprotein-as... | 69 | 0.002 | 38.9 | 38 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 26 | Q9TU66 | 240 | RSMB_MONDO Small nuclear ribonucleoprotein-as... | 71 | 0.002 | 38.5 | 34 | 56 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 27 | Q9PV94 | 240 | RSMB_CHICK Small nuclear ribonucleoprotein-as... | 71 | 0.003 | 38.5 | 34 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 28 | P17136 | 214 | RSMB_RAT Small nuclear ribonucleoprotein-asso... | 49 | 0.003 | 38.1 | 37 | 65 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 29 | P27048 | 231 | RSMB_MOUSE Small nuclear ribonucleoprotein-as... | 49 | 0.003 | 38.1 | 37 | 65 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0071204; C:histone pre-mRNA 3'end processing complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0071208; F:histone pre-mRNA DCP binding; IDA:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 30 | Q5R628 | 91 | LSM5_PONAB U6 snRNA-associated Sm-like protei... | 53 | 0.003 | 36.6 | 40 | 62 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 31 | P62322 | 91 | LSM5_MOUSE U6 snRNA-associated Sm-like protei... | 53 | 0.003 | 36.6 | 40 | 62 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |