rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
421 | P30352 | 221 | SRSF2_CHICK Serine/arginine-rich splicing fac... | 82 | 0.003 | 42.7 | 27 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 422 | B4QV17 | 154 | NCBP2_DROSI Nuclear cap-binding protein subun... | 79 | 0.00003 | 47.8 | 34 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 423 | B4IBA4 | 154 | NCBP2_DROSE Nuclear cap-binding protein subun... | 79 | 0.00003 | 47.8 | 34 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 424 | Q9V3L6 | 154 | NCBP2_DROME Nuclear cap-binding protein subun... | 79 | 0.00003 | 47.8 | 34 | 49 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000339; F:RNA cap binding; ISS:FlyBase. | | | | | | | | | | GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0045071; P:negative regulation of viral genome replication; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0031053; P:primary miRNA processing; IMP:UniProtKB.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:FlyBase. | 425 | Q28ZX3 | 225 | PABP2_DROPS Polyadenylate-binding protein 2 O... | 107 | 0.67 | 35.4 | 29 | 44 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0042802; F:identical protein binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 426 | B4M205 | 154 | NCB2A_DROVI Nuclear cap-binding protein subun... | 79 | 0.00003 | 47.8 | 35 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 427 | Q62376 | 448 | RU17_MOUSE U1 small nuclear ribonucleoprotein... | 74 | 0.0008 | 45.4 | 26 | 51 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 428 | Q66KL9 | 392 | RBM42_XENTR RNA-binding protein 42 OS=Xenopus... | 72 | 1.3 | 35 | 25 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 429 | Q177H0 | 159 | NCBP2_AEDAE Nuclear cap-binding protein subun... | 79 | 0.003 | 42 | 30 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 430 | Q20497 | 3498 | MED12_CAEEL Mediator of RNA polymerase II tra... | 235 | 0.019 | 41.6 | 25 | 40 | GO:0016592; C:mediator complex; IEA:InterPro. | | | | | | | | | | GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase. | 431 | Q66II8 | 471 | RU17_XENTR U1 small nuclear ribonucleoprotein... | 74 | 0.002 | 44.3 | 26 | 51 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 432 | Q7TN33 | 460 | CELF6_MOUSE CUGBP Elav-like family member 6 O... | 70 | 1.3 | 35 | 29 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 433 | Q5R9H4 | 587 | A1CF_PONAB APOBEC1 complementation factor OS=... | 102 | 0.00001 | 51.2 | 32 | 52 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 434 | Q96J87 | 481 | CELF6_HUMAN CUGBP Elav-like family member 6 O... | 70 | 1.4 | 35 | 29 | 50 | GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005634; C:nucleus; NAS:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 435 | Q6DRG1 | 402 | RBM42_DANRE RNA-binding protein 42 OS=Danio r... | 72 | 0.59 | 36.2 | 25 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0002088; P:lens development in camera-type eye; IMP:ZFIN. | 436 | Q5YD48 | 595 | A1CF_MOUSE APOBEC1 complementation factor OS=... | 102 | 0.00001 | 51.2 | 32 | 53 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:HGNC.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 437 | Q5PQP1 | 403 | RBMS1_RAT RNA-binding motif, single-stranded-... | 172 | 0.00001 | 51.2 | 24 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 438 | Q05AT9 | 272 | U1SBP_XENLA U11/U12 small nuclear ribonucleop... | 79 | 2.1 | 34.3 | 25 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 439 | B3P0D7 | 154 | NCBP2_DROER Nuclear cap-binding protein subun... | 79 | 0.00003 | 47.8 | 34 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 440 | Q54KR9 | 234 | NCBP2_DICDI Nuclear cap-binding protein subun... | 82 | 0.00006 | 48.1 | 32 | 50 | GO:0005846; C:nuclear cap binding complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000339; F:RNA cap binding; ISS:dictyBase. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. | 441 | Q1RMR2 | 439 | RU17_BOVIN U1 small nuclear ribonucleoprotein... | 74 | 0.001 | 44.7 | 26 | 51 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 442 | Q9NQ94 | 594 | A1CF_HUMAN APOBEC1 complementation factor OS=... | 102 | 0.00002 | 51.2 | 32 | 52 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:Reactome.::GO:0016556; P:mRNA modification; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; IDA:UniProtKB. | 443 | P23588 | 611 | IF4B_HUMAN Eukaryotic translation initiation ... | 75 | 0.00002 | 50.8 | 40 | 59 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016281; C:eukaryotic translation initiation factor 4F complex; TAS:ProtInc. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; TAS:ProtInc. | | | | | | | | | | GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006446; P:regulation of translational initiation; TAS:ProtInc. | 444 | B4LFQ9 | 595 | SHEP_DROVI Protein alan shepard OS=Drosophila... | 174 | 0.00002 | 50.8 | 25 | 41 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 445 | B4IX08 | 609 | SHEP_DROGR Protein alan shepard OS=Drosophila... | 174 | 0.00002 | 50.8 | 25 | 41 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 446 | Q6BT10 | 276 | EIF3G_DEBHA Eukaryotic translation initiation... | 83 | 0.77 | 35.4 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 447 | O13829 | 261 | RU17_SCHPO U1 small nuclear ribonucleoprotein... | 74 | 0.003 | 43.1 | 26 | 50 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030619; F:U1 snRNA binding; ISS:PomBase. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase. | 448 | A2SW84 | 165 | NCBP2_SINCH Nuclear cap-binding protein subun... | 81 | 0.036 | 38.9 | 31 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB. | 449 | Q8IY67 | 606 | RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 O... | 188 | 0.00002 | 50.8 | 24 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 450 | A5E1Z4 | 279 | EIF3G_LODEL Eukaryotic translation initiation... | 85 | 0.0007 | 45.1 | 29 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 451 | P0CP88 | 504 | PPIL4_CRYNJ Peptidyl-prolyl cis-trans isomera... | 83 | 0.95 | 35.8 | 27 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006457; P:protein folding; IEA:UniProtKB-KW. |