rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
271 | Q03251 | 169 | GRP8_ARATH Glycine-rich RNA-binding protein 8... | 67 | 0.00002 | 48.5 | 34 | 64 | GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005777; C:peroxisome; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045087; P:innate immune response; IDA:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IDA:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR. | 272 | P49310 | 166 | GRP1_SINAL Glycine-rich RNA-binding protein G... | 72 | 0.0000004 | 53.5 | 36 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 273 | P37838 | 685 | NOP4_YEAST Nucleolar protein 4 OS=Saccharomyc... | 48 | 0.68 | 36.2 | 35 | 58 | GO:0005730; C:nucleolus; TAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; TAS:SGD. | 274 | O14327 | 166 | PAB2_SCHPO Polyadenylate-binding protein 2 OS... | 74 | 5.2 | 32.3 | 23 | 51 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:PomBase. | 275 | Q5ZLN5 | 414 | TADBP_CHICK TAR DNA-binding protein 43 OS=Gal... | 177 | 0.00000007 | 58.2 | 30 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 276 | Q03250 | 176 | GRP7_ARATH Glycine-rich RNA-binding protein 7... | 72 | 0.000003 | 50.8 | 33 | 63 | GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.::GO:0005777; C:peroxisome; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:TAIR.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0003697; F:single-stranded DNA binding; IDA:TAIR. | | | | | | | | | | GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0032508; P:DNA duplex unwinding; IDA:TAIR.::GO:0045087; P:innate immune response; IDA:TAIR.::GO:0006406; P:mRNA export from nucleus; IMP:TAIR.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009409; P:response to cold; IGI:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR.::GO:0010501; P:RNA secondary structure unwinding; IDA:TAIR.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR. | 277 | P84586 | 388 | RMXRL_RAT RNA-binding motif protein, X chromo... | 76 | 0.000008 | 51.6 | 30 | 61 | GO:0071013; C:catalytic step 2 spliceosome; ISS:UniProtKB.::GO:0070062; C:extracellular vesicular exosome; ISS:UniProtKB.::GO:0005719; C:nuclear euchromatin; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0071347; P:cellular response to interleukin-1; ISS:UniProtKB.::GO:0006509; P:membrane protein ectodomain proteolysis; ISS:UniProtKB.::GO:0006376; P:mRNA splice site selection; IDA:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 278 | Q42404 | 427 | RU17_ARATH U1 small nuclear ribonucleoprotein... | 81 | 0.0000006 | 55.1 | 26 | 54 | GO:0005634; C:nucleus; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:TAIR. | 279 | O14369 | 388 | SCE3_SCHPO Probable RNA-binding protein sce3 ... | 79 | 0.0004 | 46.2 | 37 | 57 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005840; C:ribosome; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:PomBase. | | | | | | | | | | GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase. | 280 | D4AE41 | 388 | RMXL1_RAT RNA binding motif protein, X-linked... | 76 | 0.00001 | 51.2 | 30 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 281 | Q9CQT2 | 265 | RBM7_MOUSE RNA-binding protein 7 OS=Mus muscu... | 75 | 0.002 | 43.5 | 29 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 282 | Q5U259 | 326 | ELV1B_XENLA ELAV-like protein 1-B OS=Xenopus ... | 80 | 0.00005 | 48.9 | 33 | 53 | GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IPI:UniProtKB. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0007369; P:gastrulation; ISS:UniProtKB.::GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB. | 283 | Q6PG31 | 283 | RNPS1_DANRE RNA-binding protein with serine-r... | 77 | 0.00002 | 49.7 | 27 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 284 | P57052 | 281 | RBM11_HUMAN Putative RNA-binding protein 11 O... | 75 | 0.053 | 39.3 | 31 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 285 | Q28E41 | 309 | RNPS1_XENTR RNA-binding protein with serine-r... | 77 | 0.0002 | 46.6 | 26 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 286 | P0C1I6 | 446 | PPIL4_RHIO9 Peptidyl-prolyl cis-trans isomera... | 83 | 0.009 | 42 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006457; P:protein folding; IEA:UniProtKB-KW. | 287 | Q9Y7Y3 | 233 | YGR4_SCHPO Uncharacterized RNA-binding protei... | 48 | 0.0000006 | 53.9 | 44 | 69 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 288 | Q7XTT4 | 707 | NUCL2_ORYSJ Nucleolin 2 OS=Oryza sativa subsp... | 218 | 0.0000002 | 57.4 | 28 | 42 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 289 | P49311 | 169 | GRP2_SINAL Glycine-rich RNA-binding protein G... | 78 | 0.0000007 | 52.8 | 37 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 290 | Q8VE97 | 489 | SRSF4_MOUSE Serine/arginine-rich splicing fac... | 182 | 0.00001 | 51.2 | 25 | 41 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 291 | Q1JQ73 | 337 | ELV1A_XENLA ELAV-like protein 1-A OS=Xenopus ... | 88 | 0.015 | 41.2 | 25 | 50 | GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; IGI:UniProtKB.::GO:0031440; P:regulation of mRNA 3'-end processing; IC:UniProtKB. | 292 | Q7QCB6 | 163 | NCBP2_ANOGA Nuclear cap-binding protein subun... | 79 | 0.0002 | 45.4 | 33 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 293 | P62997 | 288 | TRA2B_RAT Transformer-2 protein homolog beta ... | 87 | 0.000008 | 51.2 | 33 | 52 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:RGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000302; P:response to reactive oxygen species; IEP:RGD. | 294 | P62996 | 288 | TRA2B_MOUSE Transformer-2 protein homolog bet... | 87 | 0.000008 | 51.2 | 33 | 52 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB. | 295 | P62995 | 288 | TRA2B_HUMAN Transformer-2 protein homolog bet... | 87 | 0.000008 | 51.2 | 33 | 52 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 296 | Q3ZBT6 | 288 | TRA2B_BOVIN Transformer-2 protein homolog bet... | 87 | 0.000008 | 51.2 | 33 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB. | 297 | Q80YT9 | 238 | RBM11_MOUSE Putative RNA-binding protein 11 O... | 75 | 0.029 | 39.7 | 31 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 298 | Q921F2 | 414 | TADBP_MOUSE TAR DNA-binding protein 43 OS=Mus... | 177 | 0.0000003 | 56.2 | 29 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 299 | P40561 | 250 | SGN1_YEAST RNA-binding protein SGN1 OS=Saccha... | 110 | 0.001 | 43.9 | 26 | 51 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0016071; P:mRNA metabolic process; IGI:SGD. | 300 | Q7SZT7 | 400 | ELAV4_XENLA ELAV-like protein 4 OS=Xenopus la... | 230 | 0.0009 | 45.1 | 22 | 40 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 301 | B0BN49 | 328 | RBMX2_RAT RNA-binding motif protein, X-linked... | 74 | 0.066 | 39.3 | 26 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | |