rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
91 | Q8C7E9 | 632 | CSTFT_MOUSE Cleavage stimulation factor subun... | 81 | 0.003 | 45.1 | 31 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; TAS:MGI. | 92 | Q44556 | 94 | RBPD_NOSS1 Putative RNA-binding protein rbpD ... | 70 | 0.0000008 | 52.8 | 36 | 57 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 93 | Q9R0U0 | 262 | SRS10_MOUSE Serine/arginine-rich splicing fac... | 79 | 0.001 | 45.4 | 29 | 49 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB. | | | | | | | | | | GO:0016482; P:cytoplasmic transport; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB. | 94 | O75494 | 262 | SRS10_HUMAN Serine/arginine-rich splicing fac... | 79 | 0.001 | 45.4 | 29 | 49 | GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; IDA:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB. | 95 | Q9H0L4 | 616 | CSTFT_HUMAN Cleavage stimulation factor subun... | 81 | 0.003 | 45.1 | 31 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 96 | Q86U06 | 439 | RBM23_HUMAN Probable RNA-binding protein 23 O... | 73 | 0.0000002 | 58.2 | 40 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro. | 97 | P0CB38 | 370 | PAB4L_HUMAN Polyadenylate-binding protein 4-l... | 390 | 0.002 | 45.1 | 24 | 40 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 98 | Q5RC80 | 524 | RBM39_PONAB RNA-binding protein 39 OS=Pongo a... | 77 | 2.1 | 35.4 | 26 | 48 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 99 | Q8VH51 | 530 | RBM39_MOUSE RNA-binding protein 39 OS=Mus mus... | 77 | 2.2 | 35.4 | 26 | 48 | GO:0005634; C:nucleus; TAS:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; TAS:MGI. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; TAS:MGI. | 100 | Q14498 | 530 | RBM39_HUMAN RNA-binding protein 39 OS=Homo sa... | 77 | 2.3 | 35.4 | 26 | 48 | GO:0005813; C:centrosome; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 101 | Q96EP5 | 407 | DAZP1_HUMAN DAZ-associated protein 1 OS=Homo ... | 99 | 0.18 | 38.9 | 27 | 51 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; TAS:ProtInc. | 102 | Q9JII5 | 406 | DAZP1_MOUSE DAZ-associated protein 1 OS=Mus m... | 99 | 0.17 | 38.9 | 27 | 51 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW. | 103 | Q98SJ2 | 360 | DAZP1_XENLA DAZ-associated protein 1 OS=Xenop... | 99 | 0.021 | 41.6 | 25 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW. | 104 | Q3ZC34 | 407 | RBMS2_BOVIN RNA-binding motif, single-strande... | 184 | 0.0000003 | 57.4 | 26 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 105 | P48809 | 421 | RB27C_DROME Heterogeneous nuclear ribonucleop... | 53 | 0.92 | 36.6 | 30 | 58 | GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005654; C:nucleoplasm; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:FlyBase.::GO:0048027; F:mRNA 5'-UTR binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003697; F:single-stranded DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0007298; P:border follicle cell migration; IMP:FlyBase.::GO:0007319; P:negative regulation of oskar mRNA translation; TAS:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; IMP:FlyBase.::GO:0045727; P:positive regulation of translation; IDA:FlyBase.::GO:0048024; P:regulation of nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 106 | P90978 | 496 | U2AF2_CAEEL Splicing factor U2AF 65 kDa subun... | 211 | 0.45 | 37.7 | 22 | 41 | GO:0005681; C:spliceosomal complex; ISS:WormBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:WormBase. | | | | | | | | | | GO:0048589; P:developmental growth; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0010172; P:embryonic body morphogenesis; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase. | 107 | Q8BIF2 | 374 | RFOX3_MOUSE RNA binding protein fox-1 homolog... | 118 | 0.00001 | 52 | 30 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 108 | Q9WX39 | 105 | RBPF_NOSS1 Putative RNA-binding protein rbpF ... | 72 | 0.00001 | 49.3 | 31 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 109 | P90727 | 488 | U2AF2_CAEBR Splicing factor U2AF 65 kDa subun... | 211 | 0.81 | 37 | 22 | 40 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 110 | B3NGA1 | 582 | SHEP_DROER Protein alan shepard OS=Drosophila... | 186 | 0.0000007 | 56.6 | 24 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 111 | Q54BM2 | 565 | PAP1A_DICDI Polyadenylate-binding protein 1-A... | 98 | 0.024 | 42 | 28 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:dictyBase. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:dictyBase. | 112 | Q8MSV2 | 578 | SHEP_DROME Protein alan shepard OS=Drosophila... | 186 | 0.0000008 | 56.2 | 24 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; IMP:UniProtKB. | 113 | B4HUE4 | 579 | SHEP_DROSE Protein alan shepard OS=Drosophila... | 186 | 0.0000008 | 56.2 | 24 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 114 | B4PIS2 | 582 | SHEP_DROYA Protein alan shepard OS=Drosophila... | 186 | 0.0000008 | 56.2 | 24 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 115 | Q6IQE0 | 516 | PU60B_DANRE Poly(U)-binding-splicing factor P... | 72 | 0.075 | 40.4 | 25 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 116 | Q24668 | 354 | SXL_DROSU Protein sex-lethal OS=Drosophila su... | 75 | 0.8 | 36.6 | 27 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 117 | Q54WM4 | 233 | EIF3G_DICDI Eukaryotic translation initiation... | 80 | 0.000002 | 53.1 | 35 | 56 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:dictyBase. | 118 | Q8WXF0 | 261 | SRS12_HUMAN Serine/arginine-rich splicing fac... | 86 | 0.018 | 41.6 | 27 | 49 | GO:0005654; C:nucleoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 119 | Q9VRV7 | 121 | PM14_DROME Pre-mRNA branch site p14-like prot... | 104 | 0.0002 | 45.4 | 31 | 50 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase. | 120 | Q09442 | 388 | SF3B4_CAEEL Splicing factor 3B subunit 4 OS=C... | 190 | 0.000002 | 54.7 | 26 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 121 | P60050 | 382 | PABP5_PONPY Polyadenylate-binding protein 5 O... | 206 | 1.7 | 35.8 | 24 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | |