rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
211 | Q93W34 | 415 | RP45C_ARATH Polyadenylate-binding protein RBP... | 181 | 8.7 | 33.5 | 22 | 38 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 212 | Q8BP71 | 449 | RFOX2_MOUSE RNA binding protein fox-1 homolog... | 107 | 0.0004 | 47.4 | 28 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; ISS:UniProtKB.::GO:0008134; F:transcription factor binding; ISS:UniProtKB. | | | | | | | | | | GO:0030520; P:intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:BHF-UCL.::GO:0010724; P:regulation of definitive erythrocyte differentiation; IDA:BHF-UCL.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 213 | Q6XE24 | 437 | RBMS3_HUMAN RNA-binding motif, single-strande... | 176 | 0.00004 | 50.8 | 23 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 214 | Q6TY21 | 218 | EPA2B_XENLA Embryonic polyadenylate-binding p... | 74 | 0.00004 | 49.3 | 35 | 59 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | | 215 | Q91903 | 389 | ELAV2_XENLA ELAV-like protein 2 OS=Xenopus la... | 102 | 3.2 | 35 | 31 | 44 | GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017131; F:uridine-rich cytoplasmic polyadenylylation element binding; IDA:UniProtKB. | | | | | | | | | | GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB. | 216 | Q8BWL5 | 431 | RBMS3_MOUSE RNA-binding motif, single-strande... | 176 | 0.00004 | 50.4 | 23 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 217 | Q5RBD3 | 436 | RBMS3_PONAB RNA-binding motif, single-strande... | 176 | 0.00004 | 50.4 | 23 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 218 | Q7ZT82 | 382 | RFX1L_DANRE RNA binding protein fox-1 homolog... | 73 | 0.005 | 43.9 | 33 | 55 | GO:0005634; C:nucleus; IDA:ZFIN. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:ZFIN. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; IDA:ZFIN.::GO:0008380; P:RNA splicing; IDA:ZFIN. | 219 | Q5PQP1 | 403 | RBMS1_RAT RNA-binding motif, single-stranded-... | 64 | 0.021 | 42 | 30 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 220 | Q0IEY3 | 688 | EIF3B_AEDAE Eukaryotic translation initiation... | 33 | 1.2 | 36.6 | 45 | 73 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. | 221 | P16914 | 483 | ELAV_DROME Protein elav OS=Drosophila melanog... | 72 | 1.3 | 36.2 | 26 | 42 | GO:0015030; C:Cajal body; IDA:FlyBase. | | | | | | | | | | GO:0003729; F:mRNA binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:FlyBase.::GO:0000900; F:translation repressor activity, nucleic acid binding; NAS:UniProtKB. | | | | | | | | | | GO:0007417; P:central nervous system development; IMP:FlyBase.::GO:0009790; P:embryo development; NAS:UniProtKB.::GO:0007281; P:germ cell development; NAS:UniProtKB.::GO:0031441; P:negative regulation of mRNA 3'-end processing; IDA:FlyBase.::GO:0007319; P:negative regulation of oskar mRNA translation; NAS:UniProtKB. | 222 | Q18409 | 179 | RSP6_CAEEL Probable splicing factor, arginine... | 74 | 0.042 | 39.7 | 28 | 53 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0008406; P:gonad development; IGI:UniProtKB.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:WormBase.::GO:0031554; P:regulation of transcription termination, DNA-dependent; IGI:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB. | 223 | Q15427 | 424 | SF3B4_HUMAN Splicing factor 3B subunit 4 OS=H... | 193 | 0.00005 | 50.4 | 24 | 43 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC. | 224 | Q91579 | 462 | CEL3A_XENLA CUGBP Elav-like family member 3-A... | 81 | 3.7 | 34.7 | 25 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB. | 225 | Q0U6E7 | 281 | EIF3G_PHANO Eukaryotic translation initiation... | 72 | 0.00005 | 49.7 | 35 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 226 | Q6AYL5 | 424 | SF3B4_RAT Splicing factor 3B subunit 4 OS=Rat... | 193 | 0.00005 | 50.4 | 24 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 227 | Q8QZY9 | 424 | SF3B4_MOUSE Splicing factor 3B subunit 4 OS=M... | 193 | 0.00005 | 50.4 | 24 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 228 | P53927 | 220 | NOP15_YEAST Ribosome biogenesis protein 15 OS... | 70 | 0.27 | 37.7 | 30 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IPI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 229 | P28659 | 486 | CELF1_MOUSE CUGBP Elav-like family member 1 O... | 78 | 9.8 | 33.5 | 27 | 50 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI. | | | | | | | | | | GO:0042835; F:BRE binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0031369; F:translation initiation factor binding; IDA:MGI. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; IDA:MGI.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:MGI.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0007286; P:spermatid development; IMP:MGI. | 230 | A4RHN3 | 303 | EIF3G_MAGO7 Eukaryotic translation initiation... | 78 | 5.3 | 33.9 | 29 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 231 | Q6MFP4 | 297 | EIF3G_NEUCR Eukaryotic translation initiation... | 72 | 0.00005 | 49.7 | 38 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 232 | Q4QQT3 | 487 | CELF1_RAT CUGBP Elav-like family member 1 OS=... | 78 | 9.5 | 33.5 | 27 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 233 | Q13148 | 414 | TADBP_HUMAN TAR DNA-binding protein 43 OS=Hom... | 76 | 0.00009 | 49.3 | 34 | 54 | GO:0005634; C:nucleus; IDA:BHF-UCL. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:BHF-UCL.::GO:0003730; F:mRNA 3'-UTR binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; IDA:BHF-UCL.::GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043922; P:negative regulation by host of viral transcription; IDA:BHF-UCL.::GO:0008380; P:RNA splicing; IDA:BHF-UCL.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. | 234 | Q2H0U6 | 303 | EIF3G_CHAGB Eukaryotic translation initiation... | 72 | 0.00006 | 49.7 | 38 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 235 | Q9IBD1 | 452 | CELF3_DANRE CUGBP Elav-like family member 3 O... | 81 | 5.2 | 34.3 | 25 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB. | 236 | Q5R5W2 | 414 | TADBP_PONAB TAR DNA-binding protein 43 OS=Pon... | 76 | 0.0001 | 49.3 | 34 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 237 | Q9CZ96 | 217 | ZCRB1_MOUSE Zinc finger CCHC-type and RNA-bin... | 72 | 0.0006 | 45.8 | 29 | 57 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 238 | P23241 | 519 | ELAV_DROVI Protein elav OS=Drosophila virilis... | 106 | 2.9 | 35 | 28 | 40 | GO:0016592; C:mediator complex; IEA:InterPro. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro. | | | | | | | | | | | 239 | Q642J5 | 373 | RFOX1_DANRE RNA binding protein fox-1 homolog... | 73 | 0.001 | 45.4 | 34 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0021854; P:hypothalamus development; IMP:ZFIN.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 240 | Q92879 | 486 | CELF1_HUMAN CUGBP Elav-like family member 1 O... | 69 | 0.18 | 38.9 | 33 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; NAS:UniProtKB. | | | | | | | | | | GO:0042835; F:BRE binding; IDA:UniProtKB.::GO:0003729; F:mRNA binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000900; F:translation repressor activity, nucleic acid binding; NAS:UniProtKB. | | | | | | | | | | GO:0009790; P:embryo development; NAS:UniProtKB.::GO:0007281; P:germ cell development; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB.::GO:0016246; P:RNA interference; NAS:UniProtKB. | 241 | A7EWN6 | 288 | EIF3G_SCLS1 Eukaryotic translation initiation... | 84 | 0.97 | 36.2 | 31 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | |