| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
121 | P60050 | 382 | PABP5_PONPY Polyadenylate-binding protein 5 O... | 206 | 1.7 | 35.8 | 24 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 122 | P60049 | 382 | PABP5_PANTR Polyadenylate-binding protein 5 O... | 206 | 1.7 | 35.8 | 24 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 123 | P60048 | 382 | PABP5_HYLLA Polyadenylate-binding protein 5 O... | 206 | 1.7 | 35.8 | 24 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 124 | Q96DU9 | 382 | PABP5_HUMAN Polyadenylate-binding protein 5 O... | 206 | 1.7 | 35.8 | 24 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 125 | P60047 | 382 | PABP5_GORGO Polyadenylate-binding protein 5 O... | 206 | 1.7 | 35.8 | 24 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 126 | Q9ZUU4 | 289 | ROC1_ARATH Ribonucleoprotein At2g37220, chlor... | 76 | 0.012 | 42.4 | 30 | 50 | GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0010319; C:stromule; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:TAIR. | | | | | | | | | | GO:0045087; P:innate immune response; IDA:TAIR.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0009737; P:response to abscisic acid stimulus; IEP:TAIR.::GO:0009409; P:response to cold; IEP:TAIR. | 127 | Q7JGR2 | 382 | PABP5_MACMU Polyadenylate-binding protein 5 O... | 79 | 1.7 | 35.8 | 27 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 128 | Q54PB2 | 895 | MRD1_DICDI Multiple RNA-binding domain-contai... | 86 | 0.005 | 44.3 | 23 | 52 | GO:0005730; C:nucleolus; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030515; F:snoRNA binding; ISS:dictyBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:dictyBase. | 129 | Q01560 | 414 | NOP3_YEAST Nucleolar protein 3 OS=Saccharomyc... | 73 | 0.021 | 42 | 29 | 55 | GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IGI:SGD.::GO:2000805; P:negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled; IDA:SGD.::GO:0017148; P:negative regulation of translation; IDA:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006415; P:translational termination; IMP:SGD. | 130 | P19339 | 354 | SXL_DROME Protein sex-lethal OS=Drosophila me... | 84 | 0.48 | 37.4 | 27 | 49 | GO:0043234; C:protein complex; IPI:FlyBase. | | | | | | | | | | GO:0008083; F:growth factor activity; IDA:FlyBase.::GO:0003730; F:mRNA 3'-UTR binding; IDA:FlyBase.::GO:0048027; F:mRNA 5'-UTR binding; IDA:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:FlyBase.::GO:0000900; F:translation repressor activity, nucleic acid binding; TAS:FlyBase. | | | | | | | | | | GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; TAS:FlyBase.::GO:0007549; P:dosage compensation; NAS:FlyBase.::GO:0019099; P:female germ-line sex determination; TAS:FlyBase.::GO:0019101; P:female somatic sex determination; TAS:FlyBase.::GO:0007281; P:germ cell development; TAS:FlyBase.::GO:0007446; P:imaginal disc growth; IMP:FlyBase.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; TAS:FlyBase.::GO:0009994; P:oocyte differentiation; IDA:FlyBase.::GO:0007131; P:reciprocal meiotic recombination; TAS:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0007548; P:sex differentiation; NAS:FlyBase.::GO:0007224; P:smoothened signaling pathway; IDA:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 131 | Q9Y388 | 322 | RBMX2_HUMAN RNA-binding motif protein, X-link... | 72 | 0.000002 | 53.9 | 33 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 132 | P49314 | 292 | ROC2_NICPL 31 kDa ribonucleoprotein, chloropl... | 78 | 0.21 | 38.5 | 29 | 47 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 133 | Q08937 | 291 | ROC2_NICSY 29 kDa ribonucleoprotein B, chloro... | 78 | 0.15 | 38.9 | 29 | 47 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 134 | P59708 | 125 | PM14_MOUSE Pre-mRNA branch site protein p14 O... | 98 | 0.0006 | 44.3 | 28 | 54 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 135 | Q9Y3B4 | 125 | PM14_HUMAN Pre-mRNA branch site protein p14 O... | 98 | 0.0006 | 44.3 | 28 | 54 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome. | 136 | Q5R1W5 | 221 | SRSF2_PANTR Serine/arginine-rich splicing fac... | 85 | 0.068 | 39.7 | 32 | 44 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 137 | B4MM23 | 581 | SHEP_DROWI Protein alan shepard OS=Drosophila... | 191 | 0.000003 | 54.7 | 24 | 42 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 138 | O59670 | 115 | PM14_SCHPO Pre-mRNA branch site p14-like prot... | 103 | 10 | 31.6 | 26 | 43 | GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase. | | | | | | | | | | GO:0000384; F:first spliceosomal transesterification activity; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase. | 139 | Q28IQ9 | 166 | CIRBP_XENTR Cold-inducible RNA-binding protei... | 73 | 0.017 | 40.4 | 29 | 48 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; ISS:UniProtKB.::GO:0007369; P:gastrulation; ISS:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; ISS:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB. | 140 | Q8R0F5 | 326 | RBMX2_MOUSE RNA-binding motif protein, X-link... | 100 | 0.19 | 38.5 | 23 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 141 | B3M3R5 | 597 | SHEP_DROAN Protein alan shepard OS=Drosophila... | 186 | 0.000004 | 54.3 | 23 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 142 | Q06A98 | 221 | SRSF2_PIG Serine/arginine-rich splicing facto... | 85 | 0.09 | 39.3 | 32 | 44 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 143 | Q6FVV7 | 443 | RRT5_CANGA Regulator of rDNA transcription pr... | 255 | 0.000004 | 53.9 | 26 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 144 | Q15434 | 407 | RBMS2_HUMAN RNA-binding motif, single-strande... | 184 | 0.000004 | 53.5 | 25 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006396; P:RNA processing; TAS:ProtInc. | 145 | P30352 | 221 | SRSF2_CHICK Serine/arginine-rich splicing fac... | 95 | 0.095 | 38.9 | 32 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 146 | B4LFQ9 | 595 | SHEP_DROVI Protein alan shepard OS=Drosophila... | 186 | 0.000004 | 53.9 | 24 | 42 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 147 | Q6PDU1 | 221 | SRSF2_RAT Serine/arginine-rich splicing facto... | 85 | 0.096 | 38.9 | 32 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 148 | Q62093 | 221 | SRSF2_MOUSE Serine/arginine-rich splicing fac... | 85 | 0.096 | 38.9 | 32 | 44 | GO:0016607; C:nuclear speck; IDA:MGI.::GO:0005681; C:spliceosomal complex; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 149 | Q01130 | 221 | SRSF2_HUMAN Serine/arginine-rich splicing fac... | 85 | 0.096 | 38.9 | 32 | 44 | GO:0016607; C:nuclear speck; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003714; F:transcription corepressor activity; NAS:UniProtKB. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 150 | Q3MHR5 | 221 | SRSF2_BOVIN Serine/arginine-rich splicing fac... | 85 | 0.096 | 38.9 | 32 | 44 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 151 | B4IX08 | 609 | SHEP_DROGR Protein alan shepard OS=Drosophila... | 186 | 0.000004 | 53.9 | 24 | 42 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. |
