rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P10964 | 1664 | RPA1_YEAST DNA-directed RNA polymerase I subu... | 1741 | 0 | 1423 | 45 | 61 | GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD. | 2 | P15398 | 1689 | RPA1_SCHPO DNA-directed RNA polymerase I subu... | 1747 | 0 | 1415 | 45 | 61 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IMP:PomBase.::GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0034503; P:protein localization to nucleolar rDNA repeats; IMP:PomBase.::GO:0006360; P:transcription from RNA polymerase I promoter; ISS:PomBase. | 3 | O35134 | 1717 | RPA1_MOUSE DNA-directed RNA polymerase I subu... | 1817 | 0 | 956 | 35 | 51 | GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 4 | O54889 | 1716 | RPA1_RAT DNA-directed RNA polymerase I subuni... | 1813 | 0 | 950 | 34 | 51 | GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:RGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009303; P:rRNA transcription; IDA:RGD. | 5 | Q86H36 | 1615 | RPA1_DICDI DNA-directed RNA polymerase I subu... | 1385 | 0 | 912 | 38 | 56 | GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase. | 6 | O95602 | 1720 | RPA1_HUMAN DNA-directed RNA polymerase I subu... | 233 | 7e-19 | 97.8 | 30 | 45 | GO:0005736; C:DNA-directed RNA polymerase I complex; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome. | 7 | P91875 | 1642 | RPA1_DROME DNA-directed RNA polymerase I subu... | 128 | 3e-20 | 102 | 39 | 58 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 8 | P16355 | 1744 | RPA1_TRYBB DNA-directed RNA polymerase I subu... | 242 | 0.00001 | 54.3 | 24 | 39 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 9 | Q5ZL98 | 1390 | RPC1_CHICK DNA-directed RNA polymerase III su... | 116 | 0.0005 | 48.9 | 24 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 10 | A4IF62 | 1390 | RPC1_BOVIN DNA-directed RNA polymerase III su... | 116 | 0.0003 | 49.7 | 24 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 11 | P18616 | 1839 | RPB1_ARATH DNA-directed RNA polymerase II sub... | 101 | 0.00000000002 | 73.2 | 41 | 52 | GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IPI:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0005773; C:vacuole; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 12 | O14802 | 1390 | RPC1_HUMAN DNA-directed RNA polymerase III su... | 116 | 0.001 | 47.4 | 23 | 49 | GO:0005666; C:DNA-directed RNA polymerase III complex; NAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IMP:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome. | 13 | O94666 | 1405 | RPC1_SCHPO DNA-directed RNA polymerase III su... | 64 | 0.01 | 44.7 | 31 | 52 | GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006383; P:transcription from RNA polymerase III promoter; ISS:PomBase. | 14 | P04051 | 1460 | RPC1_YEAST DNA-directed RNA polymerase III su... | 112 | 0.0000002 | 60.1 | 29 | 49 | GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD. | 15 | Q8SSC4 | 1599 | RPB1_ENCCU DNA-directed RNA polymerase II sub... | 185 | 0.0000000002 | 70.1 | 26 | 46 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 16 | Q6BI69 | 1457 | RPC1_DEBHA DNA-directed RNA polymerase III su... | 98 | 0.000003 | 56.2 | 32 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 17 | P36594 | 1752 | RPB1_SCHPO DNA-directed RNA polymerase II sub... | 115 | 0.0000000000007 | 77.8 | 37 | 53 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; TAS:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:PomBase.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IC:PomBase. | 18 | Q86AQ5 | 1450 | RPC1_DICDI DNA-directed RNA polymerase III su... | 139 | 0.0000001 | 60.8 | 29 | 47 | GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase. | 19 | P08968 | 1530 | RPC1_TRYBB DNA-directed RNA polymerase III su... | 112 | 0.00000001 | 63.9 | 34 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 20 | P08775 | 1970 | RPB1_MOUSE DNA-directed RNA polymerase II sub... | 102 | 0.00000001 | 64.3 | 37 | 53 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:MGI.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 21 | P24928 | 1970 | RPB1_HUMAN DNA-directed RNA polymerase II sub... | 102 | 0.00000001 | 64.3 | 37 | 53 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0031625; F:ubiquitin protein ligase binding; IPI:BHF-UCL. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 22 | P04052 | 1887 | RPB1_DROME DNA-directed RNA polymerase II sub... | 102 | 0.0000000003 | 69.3 | 39 | 51 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase. | 23 | P11512 | 880 | RPOA1_SULAC DNA-directed RNA polymerase subun... | 127 | 0.000000000000002 | 86.3 | 35 | 51 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 24 | P35084 | 1727 | RPB1_DICDI DNA-directed RNA polymerase II sub... | 128 | 0.000000000000003 | 85.9 | 33 | 57 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; ISS:dictyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 25 | P35074 | 1853 | RPB1_CAEBR DNA-directed RNA polymerase II sub... | 154 | 0.0000000004 | 68.9 | 32 | 47 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 26 | P16356 | 1856 | RPB1_CAEEL DNA-directed RNA polymerase II sub... | 132 | 0.0000000002 | 70.1 | 33 | 48 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001055; F:RNA polymerase II activity; IMP:WormBase. | | | | | | | | | | GO:0008356; P:asymmetric cell division; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0010458; P:exit from mitosis; IMP:WormBase.::GO:0007369; P:gastrulation; IMP:WormBase.::GO:0007052; P:mitotic spindle organization; IMP:WormBase.::GO:0042789; P:mRNA transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006479; P:protein methylation; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase. | 27 | P31813 | 905 | RPOA1_THECE DNA-directed RNA polymerase subun... | 121 | 0.00000000000002 | 82.4 | 36 | 47 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 28 | P04050 | 1733 | RPB1_YEAST DNA-directed RNA polymerase II sub... | 103 | 0.000000000006 | 74.7 | 37 | 55 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD. | 29 | Q75A34 | 1745 | RPB1_ASHGO DNA-directed RNA polymerase II sub... | 141 | 0.0000000000007 | 78.2 | 31 | 51 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro. | 30 | Q980R2 | 880 | RPOA1_SULSO DNA-directed RNA polymerase subun... | 128 | 0.0000000000006 | 77.8 | 33 | 48 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | P28363 | 638 | RPA1_EUPOC DNA-directed RNA polymerase I subu... | 688 | 8e-96 | 329 | 33 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |