rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | Q9FVQ1 | 557 | NUCL1_ARATH Nucleolin 1 OS=Arabidopsis thalia... | 60 | 1.7 | 34.7 | 25 | 48 | GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0010588; P:cotyledon vascular tissue pattern formation; IMP:TAIR.::GO:0000478; P:endonucleolytic cleavage involved in rRNA processing; IMP:TAIR.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0010305; P:leaf vascular tissue pattern formation; IMP:TAIR.::GO:0080056; P:petal vascular tissue pattern formation; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0080057; P:sepal vascular tissue pattern formation; IMP:TAIR. | 62 | Q04836 | 329 | ROC3_ARATH 31 kDa ribonucleoprotein, chloropl... | 212 | 0.0004 | 45.8 | 22 | 37 | GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:TAIR. | | | | | | | | | | GO:0045087; P:innate immune response; IDA:TAIR.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0009451; P:RNA modification; IMP:TAIR. | 63 | Q9ZQA8 | 609 | PABPX_ARATH Probable polyadenylate-binding pr... | 58 | 0.00004 | 49.7 | 43 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 64 | Q8C854 | 591 | MYEF2_MOUSE Myelin expression factor 2 OS=Mus... | 60 | 1.1 | 35.4 | 33 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 65 | Q6CKV6 | 462 | NOP12_KLULA Nucleolar protein 12 OS=1267 / NR... | 69 | 0.00001 | 50.8 | 30 | 54 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 66 | P41891 | 500 | GAR2_SCHPO Protein gar2 OS=Schizosaccharomyce... | 53 | 0.003 | 43.5 | 40 | 60 | GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:PomBase. | | | | | | | | | | GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0006364; P:rRNA processing; IMP:PomBase. | 67 | Q6CDH3 | 629 | PABP_YARLI Polyadenylate-binding protein, cyt... | 209 | 0.00001 | 51.2 | 27 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 68 | Q6TY21 | 218 | EPA2B_XENLA Embryonic polyadenylate-binding p... | 101 | 0.019 | 40 | 30 | 50 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | | 69 | P51989 | 346 | RO21_XENLA Heterogeneous nuclear ribonucleopr... | 59 | 0.022 | 40.4 | 32 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 70 | Q804A5 | 218 | EPA2A_XENLA Embryonic polyadenylate-binding p... | 92 | 0.23 | 37 | 29 | 48 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | | 71 | O13845 | 603 | RSD1_SCHPO RNA-binding protein rsd1 OS=Schizo... | 187 | 0.00002 | 50.4 | 25 | 43 | GO:0005681; C:spliceosomal complex; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase. | 72 | Q9P2K5 | 600 | MYEF2_HUMAN Myelin expression factor 2 OS=Hom... | 55 | 1.1 | 35.4 | 33 | 56 | GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0014902; P:myotube differentiation; IEP:UniProtKB.::GO:0030182; P:neuron differentiation; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 73 | Q8C5L7 | 375 | RBM34_MOUSE RNA-binding protein 34 OS=Mus mus... | 64 | 0.00003 | 49.7 | 31 | 55 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 74 | Q08473 | 344 | SQD_DROME RNA-binding protein squid OS=Drosop... | 97 | 0.00004 | 49.3 | 34 | 53 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0000785; C:chromatin; IDA:FlyBase.::GO:0005737; C:cytoplasm; TAS:FlyBase.::GO:0035062; C:omega speckle; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; TAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0008069; P:dorsal/ventral axis specification, ovarian follicular epithelium; IMP:FlyBase.::GO:0006406; P:mRNA export from nucleus; NAS:FlyBase.::GO:0033119; P:negative regulation of RNA splicing; IMP:FlyBase.::GO:0017148; P:negative regulation of translation; TAS:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:FlyBase.::GO:0030720; P:oocyte localization involved in germarium-derived egg chamber formation; IMP:FlyBase.::GO:0016325; P:oocyte microtubule cytoskeleton organization; IMP:FlyBase.::GO:0007297; P:ovarian follicle cell migration; IMP:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; IEP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 75 | Q9P3U1 | 464 | YKX5_SCHPO Uncharacterized RNA-binding protei... | 203 | 5.4 | 33.1 | 21 | 43 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:PomBase. | 76 | P19682 | 276 | ROC3_NICSY 28 kDa ribonucleoprotein, chloropl... | 243 | 0.00006 | 48.1 | 22 | 37 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 77 | P19683 | 315 | ROC4_NICSY 31 kDa ribonucleoprotein, chloropl... | 58 | 0.082 | 38.5 | 31 | 55 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 78 | Q9TTV2 | 341 | ROA2_SAGOE Heterogeneous nuclear ribonucleopr... | 59 | 0.014 | 41.2 | 32 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 79 | Q08935 | 273 | ROC1_NICSY 29 kDa ribonucleoprotein A, chloro... | 61 | 0.0002 | 46.2 | 33 | 56 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 80 | Q6FUS6 | 396 | NOP12_CANGA Nucleolar protein 12 OS=NRRL Y-65... | 70 | 0.00008 | 48.5 | 29 | 53 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 81 | Q44554 | 103 | RBPB_NOSS1 Putative RNA-binding protein rbpB ... | 51 | 0.00009 | 45.4 | 37 | 63 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 82 | Q9WX37 | 99 | RBPE_NOSS1 Putative RNA-binding protein rbpE ... | 60 | 0.0001 | 45.1 | 35 | 60 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 83 | O13741 | 438 | NOP12_SCHPO Nucleolar protein 12 OS=Schizosac... | 65 | 0.0001 | 47.8 | 29 | 55 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase. | 84 | Q8CCS6 | 302 | PABP2_MOUSE Polyadenylate-binding protein 2 O... | 84 | 6.8 | 32.7 | 27 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; TAS:MGI. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; TAS:MGI. | 85 | P15771 | 694 | NUCL_CHICK Nucleolin OS=Gallus gallus (Chicke... | 238 | 0.0007 | 45.8 | 26 | 42 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 86 | Q28165 | 306 | PABP2_BOVIN Polyadenylate-binding protein 2 O... | 84 | 6.2 | 32.7 | 27 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 87 | Q24562 | 416 | U2AF2_DROME Splicing factor U2AF 50 kDa subun... | 200 | 0.0001 | 47.8 | 19 | 40 | GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; TAS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008187; F:poly-pyrimidine tract binding; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0051168; P:nuclear export; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 88 | Q1DXH0 | 768 | PABP_COCIM Polyadenylate-binding protein, cyt... | 176 | 0.006 | 42.7 | 28 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 89 | Q86U42 | 306 | PABP2_HUMAN Polyadenylate-binding protein 2 O... | 84 | 7.6 | 32.3 | 27 | 52 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006936; P:muscle contraction; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 90 | Q6NVP7 | 296 | PABP2_XENTR Polyadenylate-binding protein 2 O... | 71 | 0.0001 | 47.4 | 30 | 48 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 91 | Q7ZXB8 | 295 | PAB2B_XENLA Polyadenylate-binding protein 2-B... | 71 | 0.0001 | 47 | 30 | 48 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. |