| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q10146 | 777 | RRP6_SCHPO Exosome complex exonuclease rrp6 O... | 522 | 1e-123 | 397 | 42 | 62 | GO:0000176; C:nuclear exosome (RNase complex); ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0070651; P:nonfunctional rRNA decay; ISS:PomBase.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; ISS:PomBase.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; ISS:PomBase.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; ISS:PomBase.::GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; ISS:PomBase.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; ISS:PomBase. | 2 | Q12149 | 733 | RRP6_YEAST Exosome complex exonuclease RRP6 O... | 527 | 1e-105 | 348 | 40 | 59 | GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0071044; P:histone mRNA catabolic process; IMP:SGD.::GO:0071040; P:nuclear polyadenylation-dependent antisense transcript catabolic process; IMP:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IMP:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071036; P:nuclear polyadenylation-dependent snoRNA catabolic process; IMP:SGD.::GO:0071037; P:nuclear polyadenylation-dependent snRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0034473; P:U1 snRNA 3'-end processing; IMP:SGD.::GO:0034475; P:U4 snRNA 3'-end processing; IMP:SGD.::GO:0034476; P:U5 snRNA 3'-end processing; IMP:SGD. | 3 | Q01780 | 885 | EXOSX_HUMAN Exosome component 10 OS=Homo sapi... | 810 | 2e-86 | 299 | 30 | 48 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IMP:UniProtKB. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0004532; F:exoribonuclease activity; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0071034; P:CUT catabolic process; IMP:UniProtKB.::GO:0071044; P:histone mRNA catabolic process; IMP:UniProtKB.::GO:0000460; P:maturation of 5.8S rRNA; IMP:UniProtKB.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:UniProtKB.::GO:0071048; P:nuclear retention of unspliced pre-mRNA at the site of transcription; IMP:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IMP:UniProtKB. | 4 | P56960 | 887 | EXOSX_MOUSE Exosome component 10 OS=Mus muscu... | 844 | 4e-83 | 290 | 29 | 45 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.::GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009048; P:dosage compensation by inactivation of X chromosome; IMP:MGI.::GO:0071044; P:histone mRNA catabolic process; ISS:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW. | 5 | A9H9B7 | 393 | RND_GLUDA Ribonuclease D OS=PAl5). GN=rnd Ord... | 279 | 5e-18 | 90.5 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 6 | Q0BVP4 | 395 | RND_GRABC Ribonuclease D OS=Granulibacter bet... | 277 | 7e-16 | 84 | 26 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 7 | A5G127 | 392 | RND_ACICJ Ribonuclease D OS=Acidiphilium cryp... | 320 | 0.0000000000001 | 77 | 25 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 8 | A6V8R6 | 376 | RND_PSEA7 Ribonuclease D OS=Pseudomonas aerug... | 286 | 0.00000000002 | 70.5 | 28 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 9 | A7HYE5 | 384 | RND_PARL1 Ribonuclease D OS=Parvibaculum lava... | 273 | 0.00000000005 | 68.9 | 26 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 10 | C6C608 | 374 | RND_DICDC Ribonuclease D OS=Dickeya dadantii ... | 302 | 0.00000000007 | 68.6 | 24 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 11 | Q6G329 | 406 | RND_BARHE Ribonuclease D OS=henselae). GN=rnd... | 271 | 0.0000000003 | 67 | 25 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 12 | Q28RA7 | 386 | RND_JANSC Ribonuclease D OS=Jannaschia sp. (s... | 259 | 0.0000000004 | 66.2 | 27 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 13 | A8GFH0 | 373 | RND_SERP5 Ribonuclease D OS=Serratia proteama... | 286 | 0.000000001 | 64.7 | 25 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 14 | B8EN54 | 399 | RND_METSB Ribonuclease D OS=Methylocella silv... | 172 | 0.000000004 | 63.2 | 30 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 15 | P44442 | 399 | RND_HAEIN Ribonuclease D OS=Haemophilus influ... | 273 | 0.000000006 | 62.8 | 24 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 16 | Q5NPM2 | 390 | RND_ZYMMO Ribonuclease D OS=Zymomonas mobilis... | 263 | 0.00000001 | 62 | 26 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 17 | Q6AJF4 | 374 | RND_DESPS Ribonuclease D OS=Desulfotalea psyc... | 270 | 0.00000001 | 61.6 | 24 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 18 | D4Z694 | 388 | RND_SPHJU Ribonuclease D OS=Sphingobium japon... | 259 | 0.00000009 | 58.9 | 25 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 19 | Q1QLI8 | 382 | RND_NITHX Ribonuclease D OS=Nitrobacter hambu... | 149 | 0.0000001 | 58.5 | 30 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 20 | O67779 | 574 | DPO1_AQUAE DNA polymerase I OS=Aquifex aeolic... | 167 | 0.0000004 | 57.4 | 28 | 49 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 21 | P09155 | 375 | RND_ECOLI Ribonuclease D OS=Escherichia coli ... | 300 | 0.0000005 | 56.2 | 24 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IMP:EcoCyc. | 22 | C9XUE4 | 369 | RND_CROTZ Ribonuclease D OS=Cronobacter turic... | 275 | 0.0000009 | 55.5 | 24 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 23 | Q5GZ75 | 363 | RND_XANOR Ribonuclease D OS=Xanthomonas oryza... | 168 | 0.00001 | 52.4 | 30 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 24 | A0KXU5 | 388 | RND_SHESA Ribonuclease D OS=Shewanella sp. (s... | 279 | 0.0002 | 48.1 | 24 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 25 | Q179T2 | 719 | MUT7_AEDAE Probable exonuclease mut-7 homolog... | 246 | 0.0006 | 47 | 26 | 43 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 26 | Q8N9H8 | 876 | MUT7_HUMAN Probable exonuclease mut-7 homolog... | 164 | 0.008 | 43.5 | 24 | 43 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 27 | Q6NRD5 | 444 | EXD1_XENLA Exonuclease 3'-5' domain-containin... | 226 | 1.7 | 35.8 | 24 | 42 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 28 | P57873 | 833 | IF2_PASMU Translation initiation factor IF-2 ... | 184 | 1.7 | 35.8 | 28 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 29 | Q14191 | 1432 | WRN_HUMAN Werner syndrome ATP-dependent helic... | 107 | 1.7 | 36.2 | 29 | 44 | GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:MGI. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IDA:UniProtKB.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.::GO:0000405; F:bubble DNA binding; IDA:UniProtKB.::GO:0009378; F:four-way junction helicase activity; IDA:UniProtKB.::GO:0051880; F:G-quadruplex DNA binding; IDA:UniProtKB.::GO:0000287; F:magnesium ion binding; IDA:UniProtKB.::GO:0030145; F:manganese ion binding; IDA:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.::GO:0000403; F:Y-form DNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0006284; P:base-excision repair; IDA:UniProtKB.::GO:0009267; P:cellular response to starvation; IDA:MGI.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0000731; P:DNA synthesis involved in DNA repair; IDA:UniProtKB.::GO:0010259; P:multicellular organismal aging; IMP:UniProtKB.::GO:0032066; P:nucleolus to nucleoplasm transport; IDA:MGI.::GO:0051345; P:positive regulation of hydrolase activity; IDA:UniProtKB.::GO:0042981; P:regulation of apoptotic process; IGI:MGI.::GO:0031297; P:replication fork processing; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0010225; P:response to UV-C; IDA:UniProtKB.::GO:0000723; P:telomere maintenance; IMP:UniProtKB. | 30 | Q8IDX6 | 3130 | RBP2A_PLAF7 Reticulocyte-binding protein 2 ho... | 86 | 6.2 | 34.3 | 27 | 56 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004872; F:receptor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016337; P:cell-cell adhesion; ISS:UniProtKB. | 31 | Q2IJL8 | 183 | RNH_ANADE Ribonuclease H OS=Anaeromyxobacter ... | 94 | 2.8 | 34.3 | 29 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004523; F:ribonuclease H activity; IEA:EC. | | | | | | | | | | |
