rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q872F4 | 172 | TCP4_NEUCR Putative RNA polymerase II transcr... | 76 | 6e-25 | 99.8 | 53 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 2 | P54000 | 292 | SUB1_YEAST RNA polymerase II transcriptional ... | 67 | 0.00000000003 | 63.5 | 45 | 61 | GO:0005634; C:nucleus; IC:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IPI:SGD. | | | | | | | | | | GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:SGD.::GO:0045945; P:positive regulation of transcription from RNA polymerase III promoter; IMP:SGD.::GO:0043618; P:regulation of transcription from RNA polymerase II promoter in response to stress; IDA:SGD.::GO:0070898; P:RNA polymerase III transcriptional preinitiation complex assembly; IDA:SGD.::GO:0006369; P:termination of RNA polymerase II transcription; IGI:SGD. | 3 | O65154 | 107 | KIWI_ARATH RNA polymerase II transcriptional ... | 97 | 0.0000000001 | 59.3 | 36 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | O65155 | 165 | KELP_ARATH RNA polymerase II transcriptional ... | 109 | 0.0000000001 | 59.7 | 35 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | P87294 | 136 | TCP4_SCHPO Putative RNA polymerase II transcr... | 69 | 0.0000000006 | 57.8 | 35 | 62 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:PomBase.::GO:0003697; F:single-stranded DNA binding; IDA:PomBase.::GO:0003713; F:transcription coactivator activity; IDA:PomBase. | | | | | | | | | | GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IDA:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | Q9VLR5 | 110 | TCP4_DROME RNA polymerase II transcriptional ... | 85 | 0.000000005 | 54.7 | 34 | 54 | GO:0005634; C:nucleus; IDA:FlyBase. | | | | | | | | | | GO:0003697; F:single-stranded DNA binding; IDA:FlyBase.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | Q94045 | 124 | TCP4_CAEEL Putative RNA polymerase II transcr... | 89 | 0.000000008 | 54.3 | 36 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 8 | Q5ZK63 | 126 | TCP4_CHICK Activated RNA polymerase II transc... | 89 | 0.0000002 | 50.4 | 36 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 9 | P11031 | 127 | TCP4_MOUSE Activated RNA polymerase II transc... | 90 | 0.0000005 | 49.3 | 34 | 54 | | | | | | | | | | | | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 10 | Q63396 | 127 | TCP4_RAT Activated RNA polymerase II transcri... | 90 | 0.0000005 | 49.3 | 34 | 54 | | | | | | | | | | | | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 11 | Q5R6D0 | 127 | TCP4_PONAB Activated RNA polymerase II transc... | 90 | 0.000003 | 47 | 34 | 53 | | | | | | | | | | | | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 12 | Q4R947 | 127 | TCP4_MACFA Activated RNA polymerase II transc... | 90 | 0.000003 | 47 | 34 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 13 | P53999 | 127 | TCP4_HUMAN Activated RNA polymerase II transc... | 90 | 0.000003 | 47 | 34 | 53 | GO:0005730; C:nucleolus; IDA:HPA.::GO:0005667; C:transcription factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB. | | | | | | | | | | GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 14 | P71165 | 148 | FLAV_DESVM Flavodoxin OS=Desulfovibrio vulgar... | 107 | 0.071 | 35.8 | 32 | 39 | | | | | | | | | | | GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0010181; F:FMN binding; IEA:InterPro.::GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:InterPro. | | | | | | | | | | GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW. | 15 | Q3V0G7 | 1038 | GARL3_MOUSE GTPase-activating Rap/Ran-GAP dom... | 57 | 4.1 | 31.2 | 30 | 46 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro. | | | | | | | | | | GO:0051056; P:regulation of small GTPase mediated signal transduction; IEA:InterPro. | 16 | A1TZT9 | 678 | DNLJ_MARAV DNA ligase OS=(Marinobacter hydroc... | 50 | 4.9 | 31.2 | 30 | 56 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW. |