| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q4IPA4 | 411 | YTH1_GIBZE mRNA 3'-end-processing protein YTH... | 215 | 1e-93 | 289 | 65 | 76 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 2 | Q7SGR2 | 317 | YTH1_NEUCR mRNA 3'-end-processing protein yth... | 231 | 4e-93 | 284 | 61 | 71 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 3 | Q5BGN2 | 254 | YTH1_EMENI mRNA 3'-end-processing protein yth... | 184 | 1e-64 | 209 | 56 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 4 | Q4WKD9 | 254 | YTH1_ASPFU mRNA 3'-end-processing protein yth... | 185 | 1e-63 | 206 | 56 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 5 | Q2URI6 | 255 | YTH1_ASPOR mRNA 3'-end-processing protein yth... | 210 | 5e-63 | 205 | 51 | 67 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 6 | Q6BTT1 | 223 | YTH1_DEBHA mRNA 3'-end-processing protein YTH... | 227 | 1e-58 | 192 | 44 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 7 | Q6CKU1 | 210 | YTH1_KLULA mRNA 3'-end-processing protein YTH... | 201 | 1e-55 | 184 | 46 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 8 | Q59T36 | 215 | YTH1_CANAL mRNA 3'-end-processing protein YTH... | 177 | 3e-55 | 183 | 53 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD. | 9 | Q6C922 | 193 | YTH1_YARLI mRNA 3'-end-processing protein YTH... | 174 | 1e-54 | 181 | 49 | 66 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 10 | Q758T3 | 209 | YTH1_ASHGO mRNA 3'-end-processing protein YTH... | 190 | 1e-53 | 179 | 48 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 11 | Q6FTL0 | 209 | YTH1_CANGA mRNA 3'-end-processing protein YTH... | 196 | 3e-52 | 175 | 46 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 12 | Q06102 | 208 | YTH1_YEAST mRNA 3'-end-processing protein YTH... | 188 | 3e-51 | 173 | 46 | 60 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD. | 13 | Q4P384 | 366 | YTH1_USTMA mRNA 3'-end-processing protein YTH... | 209 | 3e-48 | 169 | 44 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 14 | Q9UTD1 | 170 | YTH1_SCHPO mRNA 3'-end-processing protein yth... | 134 | 0.2 | 35.8 | 28 | 33 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IC:PomBase. | 15 | O95639 | 269 | CPSF4_HUMAN Cleavage and polyadenylation spec... | 101 | 1e-36 | 136 | 61 | 75 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 16 | O19137 | 243 | CPSF4_BOVIN Cleavage and polyadenylation spec... | 101 | 1e-36 | 135 | 61 | 75 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 17 | Q5FVR7 | 243 | CPSF4_RAT Cleavage and polyadenylation specif... | 101 | 2e-36 | 135 | 61 | 75 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 18 | Q6DJP7 | 269 | CPSF4_XENLA Cleavage and polyadenylation spec... | 122 | 9e-36 | 134 | 53 | 68 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 19 | Q66KE3 | 269 | CPSF4_XENTR Cleavage and polyadenylation spec... | 101 | 5e-35 | 132 | 60 | 74 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 20 | P0CS64 | 332 | YTH1_CRYNJ mRNA 3'-end-processing protein YTH... | 204 | 2e-34 | 132 | 38 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 21 | P0CS65 | 332 | YTH1_CRYNB mRNA 3'-end-processing protein YTH... | 204 | 2e-34 | 132 | 38 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 22 | A6NMK7 | 179 | CPS4L_HUMAN Putative cleavage and polyadenyla... | 128 | 6.7 | 31.2 | 25 | 41 | | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 23 | Q8BQZ5 | 211 | CPSF4_MOUSE Cleavage and polyadenylation spec... | 101 | 2e-18 | 85.1 | 43 | 51 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 24 | A9LNK9 | 631 | CPSF_ARATH Cleavage and polyadenylation speci... | 95 | 2e-16 | 82.4 | 43 | 58 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 25 | Q0DA50 | 665 | C3H45_ORYSJ Zinc finger CCCH domain-containin... | 84 | 0.000000000000005 | 78.2 | 44 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 26 | Q8CHP0 | 950 | ZC3H3_MOUSE Zinc finger CCCH domain-containin... | 100 | 0.0000000000002 | 73.6 | 40 | 56 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; ISS:UniProtKB. | 27 | Q8IXZ2 | 948 | ZC3H3_HUMAN Zinc finger CCCH domain-containin... | 147 | 0.0000000000003 | 73.2 | 33 | 48 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB. | 28 | O74823 | 377 | YBJC_SCHPO Zinc finger CCCH domain-containing... | 126 | 0.00000002 | 58.2 | 29 | 44 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 29 | Q3ED78 | 470 | C3H7_ARATH Zinc finger CCCH domain-containing... | 55 | 3 | 33.1 | 35 | 45 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | P61129 | 1189 | ZC3H6_HUMAN Zinc finger CCCH domain-containin... | 141 | 0.005 | 42 | 26 | 40 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | Q9JJ48 | 305 | ZC3H8_MOUSE Zinc finger CCCH domain-containin... | 80 | 0.0000002 | 55.1 | 40 | 54 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; ISS:UniProtKB.::GO:0046677; P:response to antibiotic; ISS:UniProtKB.::GO:0043029; P:T cell homeostasis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |
