rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q6BGW8 | 515 | TFB2_DEBHA RNA polymerase II transcription fa... | 527 | 4e-131 | 397 | 41 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 2 | Q6BZX4 | 467 | TFB2_YARLI RNA polymerase II transcription fa... | 494 | 7e-130 | 392 | 45 | 65 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | Q6CLR2 | 496 | TFB2_KLULA RNA polymerase II transcription fa... | 491 | 6e-122 | 372 | 42 | 62 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | Q75B51 | 514 | TFB2_ASHGO RNA polymerase II transcription fa... | 518 | 6e-120 | 368 | 41 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | P87303 | 447 | TFB2_SCHPO RNA polymerase II transcription fa... | 451 | 2e-115 | 354 | 42 | 62 | GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005675; C:holo TFIIH complex; ISS:PomBase.::GO:0000112; C:nucleotide-excision repair factor 3 complex; ISS:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase. | | | | | | | | | | GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:PomBase. | 6 | Q6FP41 | 504 | TFB2_CANGA RNA polymerase II transcription fa... | 514 | 9e-112 | 347 | 39 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | Q02939 | 513 | TFB2_YEAST RNA polymerase II transcription fa... | 527 | 7e-110 | 342 | 39 | 58 | GO:0000439; C:core TFIIH complex; IDA:SGD.::GO:0005675; C:holo TFIIH complex; IDA:SGD.::GO:0000112; C:nucleotide-excision repair factor 3 complex; IPI:SGD. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:SGD. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IMP:SGD.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD. | 8 | O70422 | 463 | TF2H4_MOUSE General transcription factor IIH ... | 482 | 1e-91 | 293 | 37 | 55 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 9 | P60027 | 462 | TF2H4_PANTR General transcription factor IIH ... | 481 | 1e-91 | 293 | 37 | 55 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 10 | Q92759 | 462 | TF2H4_HUMAN General transcription factor IIH ... | 481 | 1e-91 | 293 | 37 | 55 | GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 11 | Q54C29 | 483 | TF2H4_DICDI General transcription factor IIH ... | 506 | 1e-52 | 190 | 29 | 49 | GO:0005675; C:holo TFIIH complex; ISS:dictyBase. | | | | | | | | | | | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; ISS:dictyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase. | 12 | Q7VJV5 | 273 | ISPH_HELHP 4-hydroxy-3-methylbut-2-enyl dipho... | 117 | 1.9 | 34.3 | 27 | 43 | | | | | | | | | | | GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro. | 13 | A5W4B2 | 207 | UREG_PSEP1 Urease accessory protein UreG OS=P... | 57 | 8.2 | 32 | 30 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0016151; F:nickel cation binding; IEA:InterPro. | | | | | | | | | | | 14 | Q1IBN6 | 207 | UREG_PSEE4 Urease accessory protein UreG OS=P... | 57 | 9.5 | 32 | 30 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0016151; F:nickel cation binding; IEA:InterPro. | | | | | | | | | | |