| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q24562 | 416 | U2AF2_DROME Splicing factor U2AF 50 kDa subun... | 340 | 3e-83 | 274 | 45 | 63 | GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; TAS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008187; F:poly-pyrimidine tract binding; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0051168; P:nuclear export; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 2 | P26368 | 475 | U2AF2_HUMAN Splicing factor U2AF 65 kDa subun... | 333 | 4e-70 | 240 | 43 | 63 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 3 | P26369 | 475 | U2AF2_MOUSE Splicing factor U2AF 65 kDa subun... | 333 | 7e-70 | 240 | 43 | 63 | GO:0016607; C:nuclear speck; TAS:UniProtKB. | | | | | | | | | | GO:0070742; F:C2H2 zinc finger domain binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IDA:UniProtKB. | 4 | P90727 | 488 | U2AF2_CAEBR Splicing factor U2AF 65 kDa subun... | 351 | 7e-69 | 237 | 43 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 5 | P90978 | 496 | U2AF2_CAEEL Splicing factor U2AF 65 kDa subun... | 347 | 2e-66 | 231 | 43 | 59 | GO:0005681; C:spliceosomal complex; ISS:WormBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:WormBase. | | | | | | | | | | GO:0048589; P:developmental growth; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0010172; P:embryonic body morphogenesis; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase. | 6 | P36629 | 517 | U2AF2_SCHPO Splicing factor U2AF 59 kDa subun... | 475 | 9e-64 | 224 | 31 | 50 | GO:0000243; C:commitment complex; IDA:PomBase.::GO:0005686; C:U2 snRNP; TAS:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; TAS:PomBase. | | | | | | | | | | GO:0000349; P:generation of catalytic spliceosome for first transesterification step; IDA:PomBase.::GO:0000348; P:nuclear mRNA branch site recognition; ISS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase. | 7 | Q9ZR40 | 573 | U2A2B_NICPL Splicing factor U2af large subuni... | 342 | 7e-54 | 198 | 34 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | Q2R0Q1 | 574 | U2A2A_ORYSJ Splicing factor U2af large subuni... | 340 | 2e-51 | 191 | 36 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 9 | Q2QKB4 | 543 | U2A2B_WHEAT Splicing factor U2af large subuni... | 338 | 3e-51 | 190 | 36 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 10 | Q9ZR39 | 555 | U2A2A_NICPL Splicing factor U2af large subuni... | 343 | 2e-50 | 188 | 34 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 11 | O23212 | 573 | U2A2A_ARATH Splicing factor U2af large subuni... | 91 | 0.011 | 42.4 | 38 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042742; P:defense response to bacterium; IEP:TAIR.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 12 | Q2QZL4 | 548 | U2A2B_ORYSJ Splicing factor U2af large subuni... | 338 | 5e-48 | 181 | 35 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 13 | Q8L716 | 589 | U2A2B_ARATH Splicing factor U2af large subuni... | 346 | 4e-44 | 170 | 33 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 14 | Q2QKB3 | 591 | U2A2A_WHEAT Splicing factor U2af large subuni... | 296 | 3e-29 | 126 | 31 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 15 | P97343 | 419 | UHMK1_MOUSE Serine/threonine-protein kinase K... | 92 | 0.0000000000005 | 74.7 | 42 | 64 | GO:0030424; C:axon; IDA:BHF-UCL.::GO:0032839; C:dendrite cytoplasm; IDA:BHF-UCL.::GO:0071598; C:neuronal ribonucleoprotein granule; IDA:BHF-UCL.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; ISS:UniProtKB.::GO:0043021; F:ribonucleoprotein complex binding; IDA:BHF-UCL.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007050; P:cell cycle arrest; ISS:HGNC.::GO:0031175; P:neuron projection development; IMP:BHF-UCL.::GO:0018105; P:peptidyl-serine phosphorylation; ISS:UniProtKB.::GO:0045948; P:positive regulation of translational initiation; IMP:BHF-UCL.::GO:0046777; P:protein autophosphorylation; ISS:HGNC.::GO:0046825; P:regulation of protein export from nucleus; ISS:HGNC. | 16 | Q63285 | 419 | UHMK1_RAT Serine/threonine-protein kinase Kis... | 92 | 0.0000000000006 | 74.7 | 42 | 64 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IC:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0018105; P:peptidyl-serine phosphorylation; IDA:UniProtKB. | 17 | O13845 | 603 | RSD1_SCHPO RNA-binding protein rsd1 OS=Schizo... | 263 | 0.000000002 | 64.3 | 23 | 40 | GO:0005681; C:spliceosomal complex; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase. | 18 | P42698 | 387 | DR111_ARATH DNA-damage-repair/toleration prot... | 100 | 0.0000002 | 57 | 38 | 55 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IGI:TAIR. | 19 | Q5RCY1 | 419 | UHMK1_PONAB Serine/threonine-protein kinase K... | 92 | 0.0000008 | 55.5 | 41 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 20 | Q8TAS1 | 419 | UHMK1_HUMAN Serine/threonine-protein kinase K... | 92 | 0.0000008 | 55.5 | 41 | 64 | GO:0030424; C:axon; ISS:BHF-UCL.::GO:0032839; C:dendrite cytoplasm; ISS:BHF-UCL.::GO:0071598; C:neuronal ribonucleoprotein granule; ISS:BHF-UCL.::GO:0005634; C:nucleus; IDA:HGNC. | | | | | | | | | | GO:0005524; F:ATP binding; IC:HGNC.::GO:0005515; F:protein binding; IPI:HGNC.::GO:0004674; F:protein serine/threonine kinase activity; IDA:HGNC.::GO:0043021; F:ribonucleoprotein complex binding; ISS:BHF-UCL.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007050; P:cell cycle arrest; IMP:HGNC.::GO:0031175; P:neuron projection development; ISS:BHF-UCL.::GO:0018105; P:peptidyl-serine phosphorylation; ISS:UniProtKB.::GO:0045948; P:positive regulation of translational initiation; ISS:BHF-UCL.::GO:0046777; P:protein autophosphorylation; IDA:HGNC.::GO:0046825; P:regulation of protein export from nucleus; IDA:HGNC. | 21 | Q28FX0 | 343 | ELAV3_XENTR ELAV-like protein 3 OS=Xenopus tr... | 96 | 0.14 | 38.5 | 26 | 43 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 22 | Q91584 | 348 | ELAV3_XENLA ELAV-like protein 3 OS=Xenopus la... | 96 | 0.17 | 38.1 | 26 | 43 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW. | 23 | Q60899 | 360 | ELAV2_MOUSE ELAV-like protein 2 OS=Mus muscul... | 62 | 1.8 | 35 | 31 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 24 | Q09442 | 388 | SF3B4_CAEEL Splicing factor 3B subunit 4 OS=C... | 82 | 0.6 | 36.6 | 27 | 50 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 25 | Q5R9Z6 | 359 | ELAV2_PONAB ELAV-like protein 2 OS=Pongo abel... | 62 | 1.9 | 35 | 31 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 26 | Q12926 | 359 | ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapie... | 62 | 1.9 | 35 | 31 | 53 | | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; TAS:ProtInc. | 27 | Q28GD4 | 375 | ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tr... | 62 | 2.6 | 34.7 | 31 | 53 | GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 28 | A2SW84 | 165 | NCBP2_SINCH Nuclear cap-binding protein subun... | 79 | 0.000002 | 51.6 | 30 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB. | 29 | C0H859 | 155 | NCBP2_SALSA Nuclear cap-binding protein subun... | 79 | 0.000002 | 51.6 | 30 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB. | 30 | Q6YVX9 | 678 | C3H16_ORYSJ Zinc finger CCCH domain-containin... | 135 | 0.000003 | 53.9 | 27 | 43 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | Q9ZQW8 | 290 | U2AFA_ORYSJ Splicing factor U2af small subuni... | 118 | 0.000003 | 52.8 | 26 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |
