Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Magnaporthe oryzae 70-15 (MG8)
Locus:
MGG_00348
Length:
620
Number of sequences:
12991
Description:
splicing factor U2AF 50 kDa subunit
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271Q01130    221   SRSF2_HUMAN Serine/arginine-rich splicing fac...780.043     39.7     26     53GO:0016607; C:nuclear speck; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003714; F:transcription corepressor activity; NAS:UniProtKB.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
272Q3MHR5    221   SRSF2_BOVIN Serine/arginine-rich splicing fac...780.043     39.7     26     53GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
273A1C646    290   EIF3G_ASPCL Eukaryotic translation initiation...730.043     40     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
274Q6PH90    174   RB8AB_XENLA RNA-binding protein 8A-B OS=Xenop...650.044     38.9     34     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
275Q9DED4    166   CIRBB_XENLA Cold-inducible RNA-binding protei...760.049     38.9     24     54GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; IMP:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB.
276Q6DRC4    293   EIF3G_DANRE Eukaryotic translation initiation...750.052     39.7     33     48GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
277A4QUF0    762   PABP_MAGO7 Polyadenylate-binding protein, cyt...750.052     40.4     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0043581; P:mycelium development; IEP:PAMGO_MGG.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
278Q1JQ73    337   ELV1A_XENLA ELAV-like protein 1-A OS=Xenopus ...620.16     38.5     31     53GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; IGI:UniProtKB.::GO:0031440; P:regulation of mRNA 3'-end processing; IC:UniProtKB.
279Q8R3C6    952   RBM19_MOUSE Probable RNA-binding protein 19 O...1080.055     40.4     28     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0040019; P:positive regulation of embryonic development; IMP:UniProtKB.
280Q9DF42    174   RB8AA_XENLA RNA-binding protein 8A-A OS=Xenop...650.055     38.9     34     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
281P28644    233   ROC1_SPIOL 28 kDa ribonucleoprotein, chloropl...770.058     39.3     29     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
282Q4PC17    858   MRD1_USTMA Multiple RNA-binding domain-contai...760.46     37.4     24     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
283Q9FMP4    124   PM14_ARATH Pre-mRNA branch site p14-like prot...700.059     37.7     27     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
284Q5AJS6    841   MRD1_CANAL Multiple RNA-binding domain-contai...710.06     40     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
285Q1HE00    274   EIF3G_BOMMO Eukaryotic translation initiation...620.065     39.3     31     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
286Q9FMY5    283   U2AFB_ARATH Splicing factor U2af small subuni...1140.067     39.3     27     44GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
287O42847    121   YFH9_SCHPO Uncharacterized RNA-binding protei...790.07     37.4     33     52GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; NAS:PomBase.
288Q08937    291   ROC2_NICSY 29 kDa ribonucleoprotein B, chloro...830.072     39.3     30     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
289Q9VRV7    121   PM14_DROME Pre-mRNA branch site p14-like prot...700.072     37.4     29     56GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.
290Q5ZLN5    414   TADBP_CHICK TAR DNA-binding protein 43 OS=Gal...1750.072     39.7     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
291Q57014    101   RBPA_SYNY3 Putative RNA-binding protein rbpA ...750.073     37     32     47
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
292Q75AP6    466   RRT5_ASHGO Regulator of rDNA transcription pr...800.073     39.7     26     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
293P49310    166   GRP1_SINAL Glycine-rich RNA-binding protein G...810.075     38.1     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
294Q05AT9    272   U1SBP_XENLA U11/U12 small nuclear ribonucleop...550.078     39.3     36     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
295Q8T6B9    637   PUF68_DROME Poly(U)-binding-splicing factor h...930.089     39.7     31     51GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; ISS:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase.
GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0007282; P:cystoblast division; IMP:FlyBase.::GO:0006376; P:mRNA splice site selection; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0001558; P:regulation of cell growth; IMP:FlyBase.
296Q15427    424   SF3B4_HUMAN Splicing factor 3B subunit 4 OS=H...760.08     39.7     29     51GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC.
297Q1ZXC2    814   PAP1B_DICDI Polyadenylate-binding protein 1-B...720.083     39.7     26     56GO:0005737; C:cytoplasm; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:dictyBase.
GO:0006378; P:mRNA polyadenylation; ISS:dictyBase.
298Q6DJI8    308   EI3GA_XENLA Eukaryotic translation initiation...750.084     39.3     33     48GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
299Q5REG1    981   SART3_PONAB Squamous cell carcinoma antigen r...740.091     39.7     27     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
300Q5RK09    320   EIF3G_RAT Eukaryotic translation initiation f...630.092     38.9     35     52GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
301A4QNI8    400   ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tr...621     35.8     31     53GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
records
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