| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | P0C6E5 | 187 | HMG3M_HUMAN Putative high mobility group prot... | 62 | 2.8 | 32.3 | 34 | 50 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 32 | P17741 | 210 | HMGB2_PIG High mobility group protein B2 OS=S... | 65 | 3.5 | 32.3 | 32 | 52 | GO:0000793; C:condensed chromosome; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0008301; F:DNA binding, bending; IDA:UniProtKB. | | | | | | | | | | GO:0006288; P:base-excision repair, DNA ligation; ISS:UniProtKB.::GO:0006265; P:DNA topological change; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 33 | P42774 | 315 | GBF1_ARATH G-box-binding factor 1 OS=Arabidop... | 45 | 3.6 | 32.7 | 31 | 58 | GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IDA:TAIR.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro. | | | | | | | | | | GO:0010629; P:negative regulation of gene expression; IEP:TAIR.::GO:0090342; P:regulation of cell aging; IMP:TAIR.::GO:0010310; P:regulation of hydrogen peroxide metabolic process; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 34 | P40628 | 242 | HMGH_IIV6 High mobility group protein homolog... | 49 | 3.7 | 32.3 | 31 | 55 | GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 35 | P40647 | 757 | SOX5_XENLA Transcription factor Sox-5 OS=Xeno... | 67 | 4 | 32.7 | 25 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0090263; P:positive regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 36 | Q00059 | 246 | TFAM_HUMAN Transcription factor A, mitochondr... | 92 | 4.5 | 32 | 34 | 48 | GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0070363; F:mitochondrial light strand promoter sense binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0006261; P:DNA-dependent DNA replication; TAS:ProtInc.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006356; P:regulation of transcription from RNA polymerase I promoter; TAS:ProtInc.::GO:0006391; P:transcription initiation from mitochondrial promoter; IDA:UniProtKB. | 37 | P35711 | 763 | SOX5_HUMAN Transcription factor SOX-5 OS=Homo... | 67 | 5 | 32.3 | 25 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0071560; P:cellular response to transforming growth factor beta stimulus; IDA:UniProtKB.::GO:0061036; P:positive regulation of cartilage development; IDA:UniProtKB.::GO:0032332; P:positive regulation of chondrocyte differentiation; IDA:UniProtKB.::GO:2000741; P:positive regulation of mesenchymal stem cell differentiation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. | 38 | P35710 | 763 | SOX5_MOUSE Transcription factor SOX-5 OS=Mus ... | 67 | 5 | 32.3 | 25 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:MGI. | | | | | | | | | | GO:0051216; P:cartilage development; IGI:MGI.::GO:0045165; P:cell fate commitment; IGI:MGI.::GO:0021953; P:central nervous system neuron differentiation; IGI:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.::GO:0048709; P:oligodendrocyte differentiation; IMP:MGI.::GO:0032332; P:positive regulation of chondrocyte differentiation; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0060164; P:regulation of timing of neuron differentiation; IMP:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 39 | Q65399 | 3066 | POLG_BCMNN Genome polyprotein OS=mosaic virus... | 62 | 5.3 | 32.3 | 37 | 53 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro. | | | | | | | | | | GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0018144; P:RNA-protein covalent cross-linking; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro. | 40 | B3DM43 | 753 | SOX5_XENTR Transcription factor Sox-5 OS=Xeno... | 78 | 5.7 | 32.3 | 24 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 41 | Q04888 | 466 | SOX10_MOUSE Transcription factor SOX-10 OS=Mu... | 103 | 5.9 | 32 | 22 | 49 | GO:0031315; C:extrinsic to mitochondrial outer membrane; IDA:MGI.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:MGI.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:UniProtKB.::GO:0000980; F:RNA polymerase II distal enhancer sequence-specific DNA binding; IDA:UniProtKB.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI. | | | | | | | | | | GO:0048469; P:cell maturation; IMP:MGI.::GO:0048589; P:developmental growth; IMP:MGI.::GO:0048546; P:digestive tract morphogenesis; IMP:MGI.::GO:0048484; P:enteric nervous system development; IMP:UniProtKB.::GO:0001701; P:in utero embryonic development; IGI:MGI.::GO:0030318; P:melanocyte differentiation; IMP:MGI.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0001755; P:neural crest cell migration; IMP:UniProtKB.::GO:0048709; P:oligodendrocyte differentiation; IMP:MGI.::GO:0007422; P:peripheral nervous system development; IGI:MGI.::GO:0014015; P:positive regulation of gliogenesis; IMP:UniProtKB.::GO:0002052; P:positive regulation of neuroblast proliferation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI. | 42 | Q9UVL1 | 92 | NHP6_CANAL Non-histone chromosomal protein 6 ... | 44 | 6 | 30 | 39 | 57 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:CGD. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 43 | Q75B82 | 94 | NHP6_ASHGO Non-histone chromosomal protein 6 ... | 40 | 6.3 | 30 | 38 | 60 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 44 | P40619 | 144 | HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil... | 62 | 6.8 | 30.8 | 32 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 45 | Q06945 | 474 | SOX4_HUMAN Transcription factor SOX-4 OS=Homo... | 45 | 6.9 | 32 | 33 | 56 | GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0001046; F:core promoter sequence-specific DNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; ISS:UniProtKB. | | | | | | | | | | GO:0035910; P:ascending aorta morphogenesis; ISS:BHF-UCL.::GO:0003289; P:atrial septum primum morphogenesis; ISS:BHF-UCL.::GO:0060070; P:canonical Wnt receptor signaling pathway; ISS:BHF-UCL.::GO:0003215; P:cardiac right ventricle morphogenesis; ISS:BHF-UCL.::GO:0003211; P:cardiac ventricle formation; ISS:UniProtKB.::GO:0071333; P:cellular response to glucose stimulus; ISS:UniProtKB.::GO:0042769; P:DNA damage response, detection of DNA damage; IDA:UniProtKB.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; IMP:UniProtKB.::GO:0021782; P:glial cell development; ISS:UniProtKB.::GO:0014009; P:glial cell proliferation; ISS:UniProtKB.::GO:0060993; P:kidney morphogenesis; ISS:BHF-UCL.::GO:0060174; P:limb bud formation; ISS:UniProtKB.::GO:0003183; P:mitral valve morphogenesis; ISS:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; IMP:BHF-UCL.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0046826; P:negative regulation of protein export from nucleus; IMP:UniProtKB.::GO:0031397; P:negative regulation of protein ubiquitination; IMP:UniProtKB.::GO:0001841; P:neural tube formation; ISS:UniProtKB.::GO:0060563; P:neuroepithelial cell differentiation; ISS:UniProtKB.::GO:0003357; P:noradrenergic neuron differentiation; ISS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IMP:UniProtKB.::GO:0090263; P:positive regulation of canonical Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:BHF-UCL.::GO:0032024; P:positive regulation of insulin secretion; ISS:UniProtKB.::GO:2000761; P:positive regulation of N-terminal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0045727; P:positive regulation of translation; IMP:UniProtKB.::GO:0002328; P:pro-B cell differentiation; ISS:BHF-UCL.::GO:0050821; P:protein stabilization; IMP:BHF-UCL.::GO:0001501; P:skeletal system development; ISS:UniProtKB.::GO:0021522; P:spinal cord motor neuron differentiation; ISS:UniProtKB.::GO:0048485; P:sympathetic nervous system development; ISS:UniProtKB.::GO:0030217; P:T cell differentiation; ISS:BHF-UCL.::GO:0060412; P:ventricular septum morphogenesis; ISS:BHF-UCL. | 46 | P26584 | 207 | HMGB2_CHICK High mobility group protein B2 OS... | 78 | 7 | 31.2 | 29 | 49 | GO:0000793; C:condensed chromosome; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0008301; F:DNA binding, bending; ISS:UniProtKB. | | | | | | | | | | GO:0006288; P:base-excision repair, DNA ligation; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 47 | Q9USU7 | 310 | YHHB_SCHPO HMG box-containing protein C28F2.1... | 81 | 7.2 | 31.6 | 27 | 52 | GO:0005794; C:Golgi apparatus; IDA:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006916; P:anti-apoptosis; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:PomBase. | 48 | P38406 | 381 | GNAL_RAT Guanine nucleotide-binding protein G... | 77 | 8.1 | 31.6 | 34 | 48 | GO:0005834; C:heterotrimeric G-protein complex; IBA:RefGenome. | | | | | | | | | | GO:0004016; F:adenylate cyclase activity; IBA:RefGenome.::GO:0031683; F:G-protein beta/gamma-subunit complex binding; IBA:RefGenome.::GO:0001664; F:G-protein coupled receptor binding; IBA:RefGenome.::GO:0005525; F:GTP binding; TAS:RGD.::GO:0003924; F:GTPase activity; IBA:RefGenome.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IBA:RefGenome.::GO:0050827; F:toxin receptor binding; IPI:RGD. | | | | | | | | | | GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IBA:RefGenome.::GO:0007608; P:sensory perception of smell; IBA:RefGenome. | 49 | Q03435 | 203 | NHP10_YEAST Non-histone protein 10 OS=Sacchar... | 226 | 9 | 31.2 | 20 | 37 | GO:0031011; C:Ino80 complex; IDA:SGD. | | | | | | | | | | GO:0045027; F:DNA end binding; IDA:SGD.::GO:0000404; F:loop DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 50 | C0H5F4 | 3179 | RBP2B_PLAF7 Reticulocyte binding protein 2 ho... | 49 | 9.4 | 31.6 | 31 | 65 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004872; F:receptor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016337; P:cell-cell adhesion; ISS:UniProtKB.::GO:0030260; P:entry into host cell; TAS:GeneDB_Pfalciparum. |
