| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q10146 | 777 | RRP6_SCHPO Exosome complex exonuclease rrp6 O... | 490 | 2e-114 | 372 | 41 | 60 | GO:0000176; C:nuclear exosome (RNase complex); ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0070651; P:nonfunctional rRNA decay; ISS:PomBase.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; ISS:PomBase.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; ISS:PomBase.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; ISS:PomBase.::GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; ISS:PomBase.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; ISS:PomBase. | 2 | Q12149 | 733 | RRP6_YEAST Exosome complex exonuclease RRP6 O... | 56 | 8 | 33.9 | 29 | 55 | GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0071044; P:histone mRNA catabolic process; IMP:SGD.::GO:0071040; P:nuclear polyadenylation-dependent antisense transcript catabolic process; IMP:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IMP:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071036; P:nuclear polyadenylation-dependent snoRNA catabolic process; IMP:SGD.::GO:0071037; P:nuclear polyadenylation-dependent snRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0034473; P:U1 snRNA 3'-end processing; IMP:SGD.::GO:0034475; P:U4 snRNA 3'-end processing; IMP:SGD.::GO:0034476; P:U5 snRNA 3'-end processing; IMP:SGD. | 3 | Q01780 | 885 | EXOSX_HUMAN Exosome component 10 OS=Homo sapi... | 541 | 1e-73 | 263 | 33 | 51 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IMP:UniProtKB. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0004532; F:exoribonuclease activity; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0071034; P:CUT catabolic process; IMP:UniProtKB.::GO:0071044; P:histone mRNA catabolic process; IMP:UniProtKB.::GO:0000460; P:maturation of 5.8S rRNA; IMP:UniProtKB.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:UniProtKB.::GO:0071048; P:nuclear retention of unspliced pre-mRNA at the site of transcription; IMP:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IMP:UniProtKB. | 4 | P56960 | 887 | EXOSX_MOUSE Exosome component 10 OS=Mus muscu... | 572 | 2e-72 | 259 | 32 | 50 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.::GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009048; P:dosage compensation by inactivation of X chromosome; IMP:MGI.::GO:0071044; P:histone mRNA catabolic process; ISS:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW. | 5 | A9H9B7 | 393 | RND_GLUDA Ribonuclease D OS=PAl5). GN=rnd Ord... | 274 | 0.000000000000002 | 82.4 | 26 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 6 | A6V8R6 | 376 | RND_PSEA7 Ribonuclease D OS=Pseudomonas aerug... | 295 | 0.000000000000008 | 80.5 | 28 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 7 | Q0BVP4 | 395 | RND_GRABC Ribonuclease D OS=Granulibacter bet... | 272 | 0.0000000000007 | 74.7 | 26 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 8 | A5G127 | 392 | RND_ACICJ Ribonuclease D OS=Acidiphilium cryp... | 320 | 0.0000000000009 | 74.3 | 24 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 9 | A7HYE5 | 384 | RND_PARL1 Ribonuclease D OS=Parvibaculum lava... | 268 | 0.000000000008 | 71.6 | 27 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 10 | Q6AJF4 | 374 | RND_DESPS Ribonuclease D OS=Desulfotalea psyc... | 276 | 0.00000000005 | 68.9 | 23 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 11 | Q6G329 | 406 | RND_BARHE Ribonuclease D OS=henselae). GN=rnd... | 272 | 0.0000000002 | 67.4 | 25 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 12 | P44442 | 399 | RND_HAEIN Ribonuclease D OS=Haemophilus influ... | 268 | 0.000000002 | 64.3 | 26 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 13 | A8GFH0 | 373 | RND_SERP5 Ribonuclease D OS=Serratia proteama... | 277 | 0.000000003 | 63.5 | 25 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 14 | B8EN54 | 399 | RND_METSB Ribonuclease D OS=Methylocella silv... | 285 | 0.00000002 | 61.2 | 26 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 15 | Q1QLI8 | 382 | RND_NITHX Ribonuclease D OS=Nitrobacter hambu... | 257 | 0.00000002 | 60.5 | 26 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 16 | Q5NPM2 | 390 | RND_ZYMMO Ribonuclease D OS=Zymomonas mobilis... | 158 | 0.00000005 | 59.7 | 30 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 17 | Q28RA7 | 386 | RND_JANSC Ribonuclease D OS=Jannaschia sp. (s... | 158 | 0.00000009 | 58.9 | 30 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 18 | D4Z694 | 388 | RND_SPHJU Ribonuclease D OS=Sphingobium japon... | 178 | 0.0000001 | 58.5 | 29 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 19 | C6C608 | 374 | RND_DICDC Ribonuclease D OS=Dickeya dadantii ... | 274 | 0.0000005 | 56.2 | 23 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 20 | C9XUE4 | 369 | RND_CROTZ Ribonuclease D OS=Cronobacter turic... | 274 | 0.000001 | 55.1 | 24 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 21 | O67779 | 574 | DPO1_AQUAE DNA polymerase I OS=Aquifex aeolic... | 167 | 0.000002 | 55.5 | 27 | 49 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 22 | P09155 | 375 | RND_ECOLI Ribonuclease D OS=Escherichia coli ... | 282 | 0.000006 | 53.1 | 25 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IMP:EcoCyc. | 23 | Q5GZ75 | 363 | RND_XANOR Ribonuclease D OS=Xanthomonas oryza... | 155 | 0.00003 | 50.8 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 24 | Q179T2 | 719 | MUT7_AEDAE Probable exonuclease mut-7 homolog... | 204 | 0.0007 | 47 | 25 | 42 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 25 | A0KXU5 | 388 | RND_SHESA Ribonuclease D OS=Shewanella sp. (s... | 279 | 0.036 | 41.2 | 24 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0033890; F:ribonuclease D activity; IEA:EC. | | | | | | | | | | GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 26 | Q9NVH0 | 496 | EXD2_HUMAN Exonuclease 3'-5' domain-containin... | 92 | 0.13 | 39.3 | 33 | 46 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 27 | Q8N9H8 | 876 | MUT7_HUMAN Probable exonuclease mut-7 homolog... | 54 | 0.27 | 38.5 | 31 | 57 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 28 | A7TSV4 | 1012 | MPH1_VANPO ATP-dependent DNA helicase MPH1 OS... | 92 | 0.55 | 37.7 | 28 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 29 | Q8IDX6 | 3130 | RBP2A_PLAF7 Reticulocyte-binding protein 2 ho... | 66 | 5.7 | 34.3 | 24 | 58 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004872; F:receptor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016337; P:cell-cell adhesion; ISS:UniProtKB. | 30 | Q0CT11 | 768 | CREB_ASPTN Probable ubiquitin carboxyl-termin... | 126 | 0.63 | 37.4 | 32 | 49 | | | | | | | | | | | GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.::GO:0004221; F:ubiquitin thiolesterase activity; ISS:UniProtKB. | | | | | | | | | | GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB. | 31 | Q8VEG4 | 496 | EXD2_MOUSE Exonuclease 3'-5' domain-containin... | 92 | 0.77 | 37 | 32 | 46 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | |
