rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1291 | Q9XSR3 | 592 | RBM47_CANFA RNA-binding protein 47 OS=Canis f... | 68 | 3.4 | 33.9 | 22 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 1292 | B7P877 | 152 | NCBP2_IXOSC Nuclear cap-binding protein subun... | 116 | 3.7 | 32.7 | 33 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 1293 | O43390 | 633 | HNRPR_HUMAN Heterogeneous nuclear ribonucleop... | 64 | 3.7 | 33.9 | 28 | 48 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 1294 | Q1MTR2 | 243 | RNPS1_SCHPO RNA-binding protein with serine-r... | 81 | 3.7 | 33.5 | 27 | 49 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:PomBase. | 1295 | Q5UPJ3 | 563 | YL116_MIMIV Uncharacterized protein L116 OS=A... | 51 | 4 | 33.9 | 47 | 59 | | | | | | | | | | | | | | | | | | | | | | 1296 | Q6BLU8 | 339 | CWC2_DEBHA Pre-mRNA-splicing factor CWC2 OS=0... | 76 | 4 | 33.5 | 30 | 47 | GO:0000974; C:Prp19 complex; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0045787; P:positive regulation of cell cycle; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; ISS:UniProtKB. | 1297 | A8Z0B9 | 169 | Y973_STAAT UPF0477 protein USA300HOU_0973 OS=... | 80 | 4 | 32.7 | 30 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 1298 | Q2FZP9 | 169 | Y951_STAA8 UPF0477 protein SAOUHSC_00951 OS=S... | 80 | 4 | 32.7 | 30 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 1299 | Q2FI62 | 169 | Y916_STAA3 UPF0477 protein SAUSA300_0916 OS=S... | 80 | 4 | 32.7 | 30 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 1300 | A6QFM5 | 169 | Y885_STAAE UPF0477 protein NWMN_0885 OS=Staph... | 80 | 4 | 32.7 | 30 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 1301 | Q5HH71 | 169 | Y1020_STAAC UPF0477 protein SACOL1020 OS=Stap... | 80 | 4 | 32.7 | 30 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 1302 | Q9SD61 | 352 | C3H42_ARATH Zinc finger CCCH domain-containin... | 119 | 4.3 | 33.5 | 27 | 40 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 1303 | Q44560 | 102 | RBPA_NOSS1 Putative RNA-binding protein rbpA ... | 77 | 7.7 | 30.8 | 32 | 47 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 1304 | Q9WUK2 | 248 | IF4H_MOUSE Eukaryotic translation initiation ... | 81 | 4.4 | 33.1 | 25 | 47 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 1305 | B0CIY2 | 161 | Y1819_BRUSI UPF0178 protein BSUIS_A1819 OS=Br... | 96 | 4.4 | 32.7 | 28 | 43 | | | | | | | | | | | | | | | | | | | | | | 1306 | Q9UQ35 | 2752 | SRRM2_HUMAN Serine/arginine repetitive matrix... | 56 | 4.5 | 33.9 | 55 | 63 | GO:0015030; C:Cajal body; IDA:UniProtKB.::GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:UniProtKB. | | | | | | | | | | GO:0070742; F:C2H2 zinc finger domain binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 1307 | Q29RT0 | 396 | RBMX_BOVIN RNA-binding motif protein, X chrom... | 75 | 4.6 | 33.5 | 23 | 44 | GO:0071013; C:catalytic step 2 spliceosome; ISS:UniProtKB.::GO:0070062; C:extracellular vesicular exosome; ISS:UniProtKB.::GO:0005719; C:nuclear euchromatin; ISS:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001047; F:core promoter binding; ISS:UniProtKB.::GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0071347; P:cellular response to interleukin-1; ISS:UniProtKB.::GO:0006509; P:membrane protein ectodomain proteolysis; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051260; P:protein homooligomerization; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 1308 | Q5XI72 | 248 | IF4H_RAT Eukaryotic translation initiation fa... | 81 | 4.6 | 33.1 | 25 | 47 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 1309 | Q54ZS8 | 222 | PABP2_DICDI Polyadenylate-binding protein 2 O... | 63 | 4.6 | 33.1 | 32 | 48 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 1310 | B4QV17 | 154 | NCBP2_DROSI Nuclear cap-binding protein subun... | 102 | 4.8 | 32.3 | 27 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 1311 | B4IBA4 | 154 | NCBP2_DROSE Nuclear cap-binding protein subun... | 102 | 4.8 | 32.3 | 27 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 1312 | Q9V3L6 | 154 | NCBP2_DROME Nuclear cap-binding protein subun... | 102 | 4.8 | 32.3 | 27 | 43 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000339; F:RNA cap binding; ISS:FlyBase. | | | | | | | | | | GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0045071; P:negative regulation of viral genome replication; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0031053; P:primary miRNA processing; IMP:UniProtKB.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:FlyBase. | 1313 | O93235 | 166 | CIRBA_XENLA Cold-inducible RNA-binding protei... | 75 | 4.8 | 32.7 | 27 | 47 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0070181; F:SSU rRNA binding; ISS:UniProtKB.::GO:0030371; F:translation repressor activity; ISS:UniProtKB. | | | | | | | | | | GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0072004; P:kidney field specification; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; IMP:UniProtKB.::GO:0009409; P:response to cold; IEP:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0034063; P:stress granule assembly; ISS:UniProtKB. | 1314 | Q2L4W6 | 567 | SPO5_SCHPO Sporulation-specific protein 5 OS=... | 102 | 4.8 | 33.5 | 27 | 39 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0033620; C:Mei2 nuclear dot; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0032120; P:ascospore-type prospore membrane assembly; IMP:PomBase.::GO:0031322; P:ascospore-type prospore-specific spindle pole body remodeling; IMP:PomBase.::GO:0007135; P:meiosis II; TAS:PomBase.::GO:0006998; P:nuclear envelope organization; IMP:PomBase.::GO:0060903; P:positive regulation of meiosis I; IEP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase. | 1315 | B3P0D7 | 154 | NCBP2_DROER Nuclear cap-binding protein subun... | 102 | 5 | 32.3 | 27 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 1316 | Q9W123 | 495 | POF_DROME Protein painting of fourth OS=Droso... | 79 | 5 | 33.5 | 29 | 41 | GO:0030849; C:autosome; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | | 1317 | Q15056 | 248 | IF4H_HUMAN Eukaryotic translation initiation ... | 81 | 5.1 | 33.1 | 25 | 47 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016281; C:eukaryotic translation initiation factor 4F complex; TAS:ProtInc.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; TAS:ProtInc. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006446; P:regulation of translational initiation; TAS:ProtInc. | 1318 | Q9BX46 | 236 | RBM24_HUMAN RNA-binding protein 24 OS=Homo sa... | 57 | 5.3 | 32.7 | 33 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; ISS:UniProtKB. | 1319 | Q2QKB3 | 591 | U2A2A_WHEAT Splicing factor U2af large subuni... | 109 | 5.3 | 33.5 | 27 | 39 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 1320 | O65001 | 656 | TE1_MAIZE Protein terminal ear1 OS=Zea mays (... | 50 | 5.3 | 33.5 | 40 | 52 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 1321 | Q5RBR8 | 228 | IF4H_PONAB Eukaryotic translation initiation ... | 81 | 5.7 | 32.7 | 25 | 47 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | |