rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
571 | Q925G0 | 155 | RBM3_RAT Putative RNA-binding protein 3 OS=Ra... | 72 | 8.3 | 31.6 | 28 | 44 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; IDA:UniProtKB. | 572 | Q09167 | 269 | SRSF5_RAT Serine/arginine-rich splicing facto... | 214 | 6.2 | 32.3 | 21 | 35 | GO:0016607; C:nuclear speck; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051726; P:regulation of cell cycle; IEP:RGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 573 | Q13243 | 272 | SRSF5_HUMAN Serine/arginine-rich splicing fac... | 214 | 6.3 | 32.3 | 21 | 35 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006376; P:mRNA splice site selection; TAS:ProtInc.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 574 | P26686 | 376 | SRR55_DROME Serine-arginine protein 55 OS=Dro... | 66 | 0.025 | 40 | 35 | 53 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0016607; C:nuclear speck; IDA:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0035327; C:transcriptionally active chromatin; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007067; P:mitosis; IMP:FlyBase.::GO:0006376; P:mRNA splice site selection; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 575 | P40561 | 250 | SGN1_YEAST RNA-binding protein SGN1 OS=Saccha... | 111 | 0.59 | 35.4 | 28 | 44 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0016071; P:mRNA metabolic process; IGI:SGD. | 576 | Q0V898 | 374 | NELFE_BOVIN Negative elongation factor E OS=B... | 58 | 0.028 | 40 | 28 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 577 | Q3MHY8 | 262 | RBM7_BOVIN RNA-binding protein 7 OS=Bos tauru... | 74 | 0.23 | 37 | 32 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 578 | Q9D0B0 | 222 | SRSF9_MOUSE Serine/arginine-rich splicing fac... | 210 | 0.86 | 35 | 23 | 36 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 579 | Q0JDM0 | 903 | C3H27_ORYSJ Zinc finger CCCH domain-containin... | 80 | 0.03 | 40.4 | 30 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 580 | P84104 | 164 | SRSF3_MOUSE Serine/arginine-rich splicing fac... | 105 | 0.03 | 38.5 | 29 | 44 | GO:0016607; C:nuclear speck; IDA:BHF-UCL. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0043274; F:phospholipase binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:BHF-UCL. | | | | | | | | | | GO:0008286; P:insulin receptor signaling pathway; TAS:BHF-UCL.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; TAS:BHF-UCL. | 581 | P84103 | 164 | SRSF3_HUMAN Serine/arginine-rich splicing fac... | 105 | 0.03 | 38.5 | 29 | 44 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 582 | Q3SZR8 | 164 | SRSF3_BOVIN Serine/arginine-rich splicing fac... | 105 | 0.03 | 38.5 | 29 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 583 | Q9Y580 | 266 | RBM7_HUMAN RNA-binding protein 7 OS=Homo sapi... | 74 | 0.25 | 36.6 | 32 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 584 | A2R7Z2 | 288 | EIF3G_ASPNC Eukaryotic translation initiation... | 98 | 0.66 | 35.4 | 27 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 585 | Q62176 | 237 | RBM38_MOUSE RNA-binding protein 38 OS=Mus mus... | 46 | 0.7 | 35 | 43 | 57 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0010830; P:regulation of myotube differentiation; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 586 | O35326 | 270 | SRSF5_MOUSE Serine/arginine-rich splicing fac... | 67 | 0.032 | 39.7 | 30 | 55 | GO:0016607; C:nuclear speck; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 587 | Q54Y98 | 326 | TRA2_DICDI Transformer-2 protein homolog OS=D... | 75 | 0.033 | 39.7 | 32 | 49 | GO:0005634; C:nucleus; ISS:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. | 588 | A3GGU2 | 271 | EIF3G_PICST Eukaryotic translation initiation... | 81 | 0.066 | 38.5 | 30 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 589 | Q08925 | 612 | MRN1_YEAST RNA-binding protein MRN1 OS=Saccha... | 62 | 0.075 | 38.9 | 24 | 56 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 590 | A1C646 | 290 | EIF3G_ASPCL Eukaryotic translation initiation... | 98 | 0.27 | 36.6 | 27 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 591 | Q9SVV9 | 759 | AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis... | 218 | 0.037 | 40 | 19 | 35 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB. | 592 | O94290 | 217 | IST3_SCHPO U2 snRNP component ist3 OS=Schizos... | 74 | 0.037 | 38.9 | 26 | 55 | GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:PomBase. | 593 | Q01560 | 414 | NOP3_YEAST Nucleolar protein 3 OS=Saccharomyc... | 74 | 0.037 | 39.7 | 31 | 46 | GO:0005737; C:cytoplasm; IMP:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IGI:SGD.::GO:2000805; P:negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled; IDA:SGD.::GO:0017148; P:negative regulation of translation; IDA:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006415; P:translational termination; IMP:SGD. | 594 | Q13242 | 221 | SRSF9_HUMAN Serine/arginine-rich splicing fac... | 107 | 0.038 | 38.9 | 28 | 40 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006376; P:mRNA splice site selection; TAS:ProtInc.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 595 | Q6CQR6 | 878 | MRD1_KLULA Multiple RNA-binding domain-contai... | 77 | 0.26 | 37.4 | 26 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 596 | Q6EQX3 | 811 | OML5_ORYSJ Protein MEI2-like 5 OS=Oryza sativ... | 77 | 0.039 | 40 | 30 | 47 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 597 | Q6PBM8 | 188 | RBM18_DANRE Probable RNA-binding protein 18 O... | 105 | 0.056 | 38.1 | 27 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 598 | P0C8Z4 | 992 | RMXL3_PANTR RNA-binding motif protein, X-link... | 116 | 0.043 | 39.7 | 24 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 599 | P90727 | 488 | U2AF2_CAEBR Splicing factor U2AF 65 kDa subun... | 98 | 0.043 | 39.7 | 22 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 600 | Q75A83 | 838 | MRD1_ASHGO Multiple RNA-binding domain-contai... | 78 | 0.42 | 36.6 | 24 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 601 | P0CR16 | 769 | MRD1_CRYNJ Multiple RNA-binding domain-contai... | 138 | 0.046 | 39.7 | 26 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. |