rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q10163 | 147 | RSMB_SCHPO Small nuclear ribonucleoprotein-as... | 162 | 3e-33 | 122 | 48 | 56 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IC:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase. | 2 | Q9N1Q0 | 240 | RSMB_MACEU Small nuclear ribonucleoprotein-as... | 154 | 5e-30 | 116 | 44 | 55 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 3 | Q55A45 | 274 | RSMB_DICDI Small nuclear ribonucleoprotein-as... | 164 | 1e-28 | 113 | 40 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 4 | P14678 | 240 | RSMB_HUMAN Small nuclear ribonucleoprotein-as... | 150 | 6e-26 | 105 | 42 | 54 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0008334; P:histone mRNA metabolic process; TAS:Reactome.::GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 5 | Q9TU67 | 240 | RSMB_ERIEU Small nuclear ribonucleoprotein-as... | 150 | 6e-26 | 105 | 42 | 54 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 6 | Q58DW4 | 240 | RSMB_BOVIN Small nuclear ribonucleoprotein-as... | 150 | 6e-26 | 105 | 42 | 54 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0042802; F:identical protein binding; ISS:AgBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 7 | P27048 | 231 | RSMB_MOUSE Small nuclear ribonucleoprotein-as... | 150 | 7e-26 | 105 | 42 | 54 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0071204; C:histone pre-mRNA 3'end processing complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0071208; F:histone pre-mRNA DCP binding; IDA:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | Q17QN3 | 240 | RSMN_BOVIN Small nuclear ribonucleoprotein-as... | 150 | 7e-26 | 105 | 42 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 9 | P63164 | 240 | RSMN_RAT Small nuclear ribonucleoprotein-asso... | 150 | 1e-25 | 104 | 42 | 53 | GO:0005685; C:U1 snRNP; IDA:RGD.::GO:0005686; C:U2 snRNP; IDA:RGD. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009725; P:response to hormone stimulus; IEP:RGD. | 10 | Q5R6I0 | 240 | RSMN_PONAB Small nuclear ribonucleoprotein-as... | 150 | 1e-25 | 104 | 42 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 11 | P63163 | 240 | RSMN_MOUSE Small nuclear ribonucleoprotein-as... | 150 | 1e-25 | 104 | 42 | 53 | GO:0005634; C:nucleus; TAS:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 12 | Q60HD3 | 240 | RSMN_MACFA Small nuclear ribonucleoprotein-as... | 150 | 1e-25 | 104 | 42 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 13 | P63162 | 240 | RSMN_HUMAN Small nuclear ribonucleoprotein-as... | 150 | 1e-25 | 104 | 42 | 53 | GO:0030532; C:small nuclear ribonucleoprotein complex; TAS:UniProtKB.::GO:0005681; C:spliceosomal complex; TAS:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008380; P:RNA splicing; TAS:UniProtKB. | 14 | Q9PV94 | 240 | RSMB_CHICK Small nuclear ribonucleoprotein-as... | 150 | 1e-25 | 104 | 42 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 15 | Q9TU66 | 240 | RSMB_MONDO Small nuclear ribonucleoprotein-as... | 150 | 9e-25 | 102 | 41 | 53 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 16 | P91918 | 160 | RSMB_CAEEL Probable small nuclear ribonucleop... | 107 | 5e-23 | 95.5 | 45 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase. | 17 | Q05856 | 199 | RSMB_DROME Small nuclear ribonucleoprotein-as... | 197 | 1e-22 | 95.9 | 39 | 48 | GO:0015030; C:Cajal body; IDA:FlyBase.::GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0045495; C:pole plasm; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007281; P:germ cell development; IMP:FlyBase.::GO:0008406; P:gonad development; IMP:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase. | 18 | P17136 | 214 | RSMB_RAT Small nuclear ribonucleoprotein-asso... | 133 | 9e-19 | 85.1 | 41 | 53 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 19 | P40018 | 196 | RSMB_YEAST Small nuclear ribonucleoprotein-as... | 101 | 1e-18 | 84.3 | 43 | 56 | GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005682; C:U5 snRNP; IDA:SGD. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD. | 20 | Q6GQ67 | 113 | LMD1A_XENLA LSM domain-containing protein 1-A... | 91 | 0.000003 | 47.8 | 31 | 45 | | | | | | | | | | | | | | | | | | | | | | 21 | A4IGZ4 | 113 | LSMD1_XENTR LSM domain-containing protein 1 O... | 98 | 0.000004 | 47.4 | 30 | 43 | | | | | | | | | | | | | | | | | | | | | | 22 | Q6NU60 | 111 | LMD1B_XENLA LSM domain-containing protein 1-B... | 91 | 0.000007 | 47 | 32 | 46 | | | | | | | | | | | | | | | | | | | | | | 23 | P53905 | 115 | LSM7_YEAST U6 snRNA-associated Sm-like protei... | 86 | 0.00002 | 45.8 | 31 | 56 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0005732; C:small nucleolar ribonucleoprotein complex; IPI:SGD.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005688; C:U6 snRNP; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:SGD. | | | | | | | | | | GO:0030490; P:maturation of SSU-rRNA; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IPI:SGD.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 24 | O74499 | 113 | LSM7_SCHPO U6 snRNA-associated Sm-like protei... | 86 | 0.00002 | 45.4 | 33 | 50 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.::GO:0005688; C:U6 snRNP; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 25 | A2BIG9 | 109 | LSMD1_DANRE LSM domain-containing protein 1 O... | 108 | 0.00004 | 44.7 | 28 | 45 | | | | | | | | | | | | | | | | | | | | | | 26 | Q9D2U5 | 125 | LSMD1_MOUSE LSM domain-containing protein 1 O... | 89 | 0.00005 | 44.7 | 31 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 27 | Q9BRA0 | 125 | LSMD1_HUMAN LSM domain-containing protein 1 O... | 89 | 0.00007 | 44.3 | 31 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 28 | Q61072 | 845 | ADAM9_MOUSE Disintegrin and metalloproteinase... | 46 | 6.7 | 31.2 | 46 | 46 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005615; C:extracellular space; IMP:BHF-UCL.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031233; C:intrinsic to external side of plasma membrane; IDA:BHF-UCL. | | | | | | | | | | GO:0005080; F:protein kinase C binding; IPI:BHF-UCL.::GO:0017124; F:SH3 domain binding; IDA:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0051044; P:positive regulation of membrane protein ectodomain proteolysis; IDA:BHF-UCL.::GO:0051384; P:response to glucocorticoid stimulus; IMP:BHF-UCL.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; IMP:BHF-UCL. | 29 | Q5RCP3 | 96 | NAA38_PONAB N-alpha-acetyltransferase 38, Nat... | 101 | 0.002 | 39.7 | 32 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 30 | Q6ZWM4 | 96 | NAA38_MOUSE N-alpha-acetyltransferase 38, Nat... | 101 | 0.002 | 39.7 | 32 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 31 | O95777 | 96 | NAA38_HUMAN N-alpha-acetyltransferase 38, Nat... | 101 | 0.002 | 39.7 | 32 | 46 | GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0017070; F:U6 snRNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; NAS:UniProtKB. |