rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P20435 | 155 | RPAB2_YEAST DNA-directed RNA polymerases I, I... | 150 | 4e-46 | 154 | 58 | 68 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD. | 2 | P36595 | 142 | RPAB2_SCHPO DNA-directed RNA polymerases I, I... | 157 | 6e-43 | 145 | 52 | 64 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IGI:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IGI:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006354; P:transcription elongation, DNA-dependent; TAS:PomBase.::GO:0006360; P:transcription from RNA polymerase I promoter; IC:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006383; P:transcription from RNA polymerase III promoter; IC:PomBase. | 3 | Q54FA8 | 133 | RPAB2_DICDI DNA-directed RNA polymerases I, I... | 79 | 2e-36 | 128 | 72 | 89 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 4 | A8WSV7 | 138 | RPAB2_CAEBR Probable DNA-directed RNA polymer... | 80 | 3e-35 | 125 | 68 | 86 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0032502; P:developmental process; ISS:UniProtKB.::GO:0000003; P:reproduction; ISS:UniProtKB. | 5 | Q24320 | 131 | RPAB2_DROME DNA-directed RNA polymerases I, I... | 79 | 3e-35 | 125 | 68 | 89 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:FlyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase. | | | | | | | | | | GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase. | 6 | O88828 | 127 | RPAB2_RAT DNA-directed RNA polymerases I, II,... | 77 | 5e-35 | 124 | 73 | 88 | GO:0005736; C:DNA-directed RNA polymerase I complex; TAS:RGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.::GO:0005666; C:DNA-directed RNA polymerase III complex; TAS:RGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:RGD. | | | | | | | | | | GO:0006360; P:transcription from RNA polymerase I promoter; TAS:RGD.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006383; P:transcription from RNA polymerase III promoter; TAS:RGD. | 7 | P61219 | 127 | RPAB2_MOUSE DNA-directed RNA polymerases I, I... | 77 | 5e-35 | 124 | 73 | 88 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IDA:MGI. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 8 | Q32PE0 | 127 | RPAB2_BOVIN DNA-directed RNA polymerases I, I... | 77 | 5e-35 | 124 | 73 | 88 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 9 | Q5R592 | 127 | RPAB2_PONAB DNA-directed RNA polymerases I, I... | 77 | 5e-35 | 124 | 73 | 88 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 10 | P61218 | 127 | RPAB2_HUMAN DNA-directed RNA polymerases I, I... | 77 | 5e-35 | 124 | 73 | 88 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 11 | P61217 | 127 | RPAB2_CRIGR DNA-directed RNA polymerases I, I... | 77 | 5e-35 | 124 | 73 | 88 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 12 | Q17684 | 137 | RPAB2_CAEEL Probable DNA-directed RNA polymer... | 80 | 3e-34 | 122 | 66 | 86 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:UniProtKB. | 13 | Q5UQ32 | 396 | RPO6_MIMIV DNA-directed RNA polymerase subuni... | 81 | 0.00000000000005 | 72 | 46 | 63 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 14 | A1RWX0 | 81 | RPOK_THEPD DNA-directed RNA polymerase subuni... | 60 | 0.000000000003 | 63.2 | 50 | 77 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 15 | Q8TT40 | 60 | RPOK_METAC DNA-directed RNA polymerase subuni... | 51 | 0.000000000007 | 61.6 | 57 | 78 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 16 | Q8ZTF9 | 106 | RPOK_PYRAE DNA-directed RNA polymerase subuni... | 92 | 0.00000000002 | 61.6 | 45 | 59 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 17 | Q8PW42 | 83 | RPOK_METMA DNA-directed RNA polymerase subuni... | 51 | 0.00000000003 | 60.5 | 55 | 78 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 18 | Q9YDJ9 | 89 | RPOK_AERPE DNA-directed RNA polymerase subuni... | 73 | 0.00000000003 | 60.5 | 44 | 64 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 19 | A2SSV2 | 62 | RPOK_METLZ DNA-directed RNA polymerase subuni... | 67 | 0.0000000003 | 57.4 | 46 | 66 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 20 | O29134 | 75 | RPOK_ARCFU DNA-directed RNA polymerase subuni... | 55 | 0.0000000003 | 57.4 | 53 | 78 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 21 | O26148 | 61 | RPOK_METTH DNA-directed RNA polymerase subuni... | 52 | 0.000000001 | 55.5 | 52 | 77 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 22 | Q8U0E8 | 57 | RPOK_PYRFU DNA-directed RNA polymerase subuni... | 51 | 0.000000002 | 55.1 | 53 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 23 | C5A244 | 57 | RPOK_THEGJ DNA-directed RNA polymerase subuni... | 51 | 0.000000002 | 54.7 | 53 | 73 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 24 | P58232 | 61 | RPOK_THEVO DNA-directed RNA polymerase subuni... | 52 | 0.000000003 | 54.3 | 52 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 25 | Q5JJD0 | 57 | RPOK_PYRKO DNA-directed RNA polymerase subuni... | 51 | 0.000000004 | 53.9 | 51 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 26 | P62015 | 57 | RPOK_PYRHO DNA-directed RNA polymerase subuni... | 51 | 0.000000004 | 53.9 | 51 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 27 | P62014 | 57 | RPOK_PYRAB DNA-directed RNA polymerase subuni... | 51 | 0.000000004 | 53.9 | 51 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:HAMAP.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP. | | | | | | | | | | | 28 | Q9HQJ0 | 60 | RPOK_HALSA DNA-directed RNA polymerase subuni... | 52 | 0.000000006 | 53.5 | 48 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 29 | B0R4Y7 | 60 | RPOK_HALS3 DNA-directed RNA polymerase subuni... | 52 | 0.000000006 | 53.5 | 48 | 71 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 30 | Q9HJ14 | 61 | RPOK_THEAC DNA-directed RNA polymerase subuni... | 52 | 0.000000007 | 53.1 | 50 | 73 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | | 31 | B9LPW5 | 59 | RPOK_HALLT DNA-directed RNA polymerase subuni... | 50 | 0.00000001 | 52.8 | 50 | 72 | GO:0030880; C:RNA polymerase complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | |