rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q9PV94 | 240 | RSMB_CHICK Small nuclear ribonucleoprotein-as... | 77 | 0.097 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 32 | Q17QN3 | 240 | RSMN_BOVIN Small nuclear ribonucleoprotein-as... | 76 | 0.1 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 33 | Q9D2U5 | 125 | LSMD1_MOUSE LSM domain-containing protein 1 O... | 48 | 0.12 | 35.4 | 35 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 34 | P40018 | 196 | RSMB_YEAST Small nuclear ribonucleoprotein-as... | 91 | 0.12 | 36.2 | 29 | 44 | GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005682; C:U5 snRNP; IDA:SGD. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD. | 35 | Q6GQ67 | 113 | LMD1A_XENLA LSM domain-containing protein 1-A... | 66 | 0.22 | 34.3 | 32 | 48 | | | | | | | | | | | | | | | | | | | | | | 36 | P91918 | 160 | RSMB_CAEEL Probable small nuclear ribonucleop... | 70 | 0.4 | 34.3 | 27 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase. | 37 | Q6FQE9 | 426 | DDI1_CANGA DNA damage-inducible protein 1 OS=... | 100 | 0.42 | 35 | 30 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:InterPro. | 38 | A4IGZ4 | 113 | LSMD1_XENTR LSM domain-containing protein 1 O... | 41 | 0.42 | 33.5 | 39 | 59 | | | | | | | | | | | | | | | | | | | | | | 39 | O82221 | 80 | RUXG_ARATH Probable small nuclear ribonucleop... | 74 | 0.56 | 32.3 | 28 | 47 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 40 | Q6NU60 | 111 | LMD1B_XENLA LSM domain-containing protein 1-B... | 41 | 0.74 | 32.7 | 39 | 59 | | | | | | | | | | | | | | | | | | | | | | 41 | Q9VXE0 | 76 | RUXG_DROME Probable small nuclear ribonucleop... | 74 | 0.77 | 32 | 28 | 50 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase. | 42 | Q9BRA0 | 125 | LSMD1_HUMAN LSM domain-containing protein 1 O... | 48 | 1.3 | 32.3 | 33 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 43 | P24715 | 81 | RUXG_MEDSA Probable small nuclear ribonucleop... | 79 | 2.9 | 30.4 | 27 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 44 | Q55EX5 | 97 | LSM5_DICDI Probable U6 snRNA-associated Sm-li... | 49 | 5.7 | 30 | 29 | 49 | GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:dictyBase.::GO:0005688; C:U6 snRNP; ISS:dictyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:dictyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. |