rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74483 | 94 | LSM8_SCHPO U6 snRNA-associated Sm-like protei... | 94 | 0.0000000000002 | 67.4 | 37 | 64 | GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase. | 2 | Q1ZXD5 | 94 | NAA38_DICDI N-alpha-acetyltransferase 38, Nat... | 87 | 0.000000003 | 55.8 | 34 | 60 | GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:dictyBase.::GO:0005688; C:U6 snRNP; ISS:dictyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:dictyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. | 3 | Q5RCP3 | 96 | NAA38_PONAB N-alpha-acetyltransferase 38, Nat... | 93 | 0.000000009 | 54.7 | 31 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | Q6ZWM4 | 96 | NAA38_MOUSE N-alpha-acetyltransferase 38, Nat... | 93 | 0.000000009 | 54.7 | 31 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 5 | O95777 | 96 | NAA38_HUMAN N-alpha-acetyltransferase 38, Nat... | 93 | 0.000000009 | 54.7 | 31 | 57 | GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0017070; F:U6 snRNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; NAS:UniProtKB. | 6 | Q3ZCE0 | 96 | NAA38_BOVIN N-alpha-acetyltransferase 38, Nat... | 93 | 0.000000009 | 54.7 | 31 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 7 | P87173 | 140 | LSM1_SCHPO U6 snRNA-associated Sm-like protei... | 79 | 0.00002 | 46.2 | 35 | 57 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005845; C:mRNA cap binding complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000339; F:RNA cap binding; ISS:PomBase. | | | | | | | | | | GO:0000290; P:deadenylation-dependent decapping of nuclear-transcribed mRNA; ISS:PomBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | P47093 | 109 | LSM8_YEAST U6 snRNA-associated Sm-like protei... | 86 | 0.00005 | 44.7 | 33 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005688; C:U6 snRNP; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 9 | Q55A45 | 274 | RSMB_DICDI Small nuclear ribonucleoprotein-as... | 81 | 0.00006 | 46.6 | 27 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 10 | P47017 | 172 | LSM1_YEAST Sm-like protein LSm1 OS=Saccharomy... | 108 | 0.0004 | 43.5 | 27 | 43 | GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0005845; C:mRNA cap binding complex; IPI:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0000339; F:RNA cap binding; IGI:SGD. | | | | | | | | | | GO:0000290; P:deadenylation-dependent decapping of nuclear-transcribed mRNA; IGI:SGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 11 | Q5E9Z8 | 133 | LSM1_BOVIN U6 snRNA-associated Sm-like protei... | 81 | 0.001 | 41.2 | 35 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0071044; P:histone mRNA catabolic process; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 12 | Q8VC85 | 133 | LSM1_MOUSE U6 snRNA-associated Sm-like protei... | 81 | 0.001 | 41.2 | 35 | 56 | GO:0005737; C:cytoplasm; ISS:MGI.::GO:0005634; C:nucleus; ISS:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0071044; P:histone mRNA catabolic process; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 13 | O15116 | 133 | LSM1_HUMAN U6 snRNA-associated Sm-like protei... | 81 | 0.001 | 41.2 | 35 | 56 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0043928; P:exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay; TAS:Reactome.::GO:0071044; P:histone mRNA catabolic process; IMP:UniProtKB.::GO:0006397; P:mRNA processing; TAS:ProtInc.::GO:0000375; P:RNA splicing, via transesterification reactions; TAS:UniProtKB. | 14 | O74499 | 113 | LSM7_SCHPO U6 snRNA-associated Sm-like protei... | 82 | 0.002 | 40.4 | 30 | 50 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.::GO:0005688; C:U6 snRNP; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 15 | Q54W83 | 129 | LSM1_DICDI Probable U6 snRNA-associated Sm-li... | 92 | 0.006 | 39.3 | 26 | 50 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000339; F:RNA cap binding; ISS:dictyBase. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:dictyBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 16 | Q58DW4 | 240 | RSMB_BOVIN Small nuclear ribonucleoprotein-as... | 77 | 0.02 | 38.5 | 30 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0042802; F:identical protein binding; ISS:AgBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 17 | P27048 | 231 | RSMB_MOUSE Small nuclear ribonucleoprotein-as... | 77 | 0.021 | 38.5 | 30 | 52 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0071204; C:histone pre-mRNA 3'end processing complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0071208; F:histone pre-mRNA DCP binding; IDA:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 18 | P14678 | 240 | RSMB_HUMAN Small nuclear ribonucleoprotein-as... | 77 | 0.022 | 38.5 | 30 | 52 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.::GO:0005683; C:U7 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0008334; P:histone mRNA metabolic process; TAS:Reactome.::GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 19 | Q9TU67 | 240 | RSMB_ERIEU Small nuclear ribonucleoprotein-as... | 77 | 0.022 | 38.5 | 30 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 20 | Q9TU66 | 240 | RSMB_MONDO Small nuclear ribonucleoprotein-as... | 77 | 0.027 | 38.5 | 30 | 52 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 21 | Q9N1Q0 | 240 | RSMB_MACEU Small nuclear ribonucleoprotein-as... | 76 | 0.029 | 38.1 | 30 | 53 | GO:0005683; C:U7 snRNP; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 22 | Q5R628 | 91 | LSM5_PONAB U6 snRNA-associated Sm-like protei... | 69 | 0.061 | 35.4 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 23 | P62322 | 91 | LSM5_MOUSE U6 snRNA-associated Sm-like protei... | 69 | 0.061 | 35.4 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 24 | Q9Y4Y9 | 91 | LSM5_HUMAN U6 snRNA-associated Sm-like protei... | 69 | 0.061 | 35.4 | 30 | 51 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; TAS:ProtInc.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0043928; P:exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay; TAS:Reactome.::GO:0006397; P:mRNA processing; TAS:ProtInc.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 25 | Q2HJH0 | 91 | LSM5_BOVIN U6 snRNA-associated Sm-like protei... | 69 | 0.061 | 35.4 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 26 | P63164 | 240 | RSMN_RAT Small nuclear ribonucleoprotein-asso... | 76 | 0.087 | 36.6 | 29 | 51 | GO:0005685; C:U1 snRNP; IDA:RGD.::GO:0005686; C:U2 snRNP; IDA:RGD. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009725; P:response to hormone stimulus; IEP:RGD. | 27 | Q5R6I0 | 240 | RSMN_PONAB Small nuclear ribonucleoprotein-as... | 76 | 0.087 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 28 | P63163 | 240 | RSMN_MOUSE Small nuclear ribonucleoprotein-as... | 76 | 0.087 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; TAS:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 29 | Q60HD3 | 240 | RSMN_MACFA Small nuclear ribonucleoprotein-as... | 76 | 0.087 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 30 | P63162 | 240 | RSMN_HUMAN Small nuclear ribonucleoprotein-as... | 76 | 0.087 | 36.6 | 29 | 51 | GO:0030532; C:small nuclear ribonucleoprotein complex; TAS:UniProtKB.::GO:0005681; C:spliceosomal complex; TAS:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008380; P:RNA splicing; TAS:UniProtKB. | 31 | Q9PV94 | 240 | RSMB_CHICK Small nuclear ribonucleoprotein-as... | 77 | 0.097 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | |