| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P12753 | 1312 | RAD50_YEAST DNA repair protein RAD50 OS=Sacch... | 1359 | 4e-169 | 546 | 32 | 53 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0030870; C:Mre11 complex; IPI:SGD.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0004017; F:adenylate kinase activity; IMP:SGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0003691; F:double-stranded telomeric DNA binding; IDA:SGD.::GO:0051880; F:G-quadruplex DNA binding; IDA:SGD.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0043047; F:single-stranded telomeric DNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006284; P:base-excision repair; IMP:SGD.::GO:0000727; P:double-strand break repair via break-induced replication; TAS:SGD.::GO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:SGD.::GO:0042138; P:meiotic DNA double-strand break formation; TAS:SGD.::GO:0000706; P:meiotic DNA double-strand break processing; TAS:SGD.::GO:0032078; P:negative regulation of endodeoxyribonuclease activity; IDA:SGD.::GO:0000722; P:telomere maintenance via recombination; IMP:SGD. | 2 | Q9UTJ8 | 1285 | RAD50_SCHPO DNA repair protein rad50 OS=Schiz... | 1363 | 7e-157 | 512 | 31 | 50 | GO:0030870; C:Mre11 complex; TAS:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; TAS:PomBase.::GO:0003677; F:DNA binding; TAS:PomBase.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000724; P:double-strand break repair via homologous recombination; IGI:PomBase.::GO:0000734; P:gene conversion at mating-type locus, DNA repair synthesis; IMP:PomBase.::GO:0031573; P:intra-S DNA damage checkpoint; TAS:PomBase.::GO:0042138; P:meiotic DNA double-strand break formation; IMP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.::GO:0000723; P:telomere maintenance; IMP:PomBase. | 3 | P70388 | 1312 | RAD50_MOUSE DNA repair protein RAD50 OS=Mus m... | 1371 | 5e-149 | 491 | 29 | 51 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0030870; C:Mre11 complex; IEA:InterPro.::GO:0045120; C:pronucleus; IDA:MGI. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 4 | Q92878 | 1312 | RAD50_HUMAN DNA repair protein RAD50 OS=Homo ... | 1375 | 8e-149 | 491 | 29 | 50 | GO:0030870; C:Mre11 complex; IDA:UniProtKB.::GO:0000784; C:nuclear chromosome, telomeric region; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:BHF-UCL.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0030674; F:protein binding, bridging; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032508; P:DNA duplex unwinding; IMP:BHF-UCL.::GO:0000724; P:double-strand break repair via homologous recombination; TAS:Reactome.::GO:0033674; P:positive regulation of kinase activity; IDA:BHF-UCL.::GO:0031954; P:positive regulation of protein autophosphorylation; IDA:BHF-UCL.::GO:0007131; P:reciprocal meiotic recombination; TAS:ProtInc.::GO:0000019; P:regulation of mitotic recombination; IDA:UniProtKB.::GO:0007004; P:telomere maintenance via telomerase; IDA:UniProtKB. | 5 | Q9JIL8 | 1312 | RAD50_RAT DNA repair protein RAD50 OS=Rattus ... | 1374 | 5e-144 | 478 | 28 | 50 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0000794; C:condensed nuclear chromosome; IDA:RGD.::GO:0016234; C:inclusion body; IDA:RGD.::GO:0030870; C:Mre11 complex; ISS:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:RGD.::GO:0005654; C:nucleoplasm; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0030674; F:protein binding, bridging; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000075; P:cell cycle checkpoint; TAS:RGD.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0051291; P:protein heterooligomerization; IDA:RGD.::GO:0007131; P:reciprocal meiotic recombination; TAS:RGD.::GO:0000019; P:regulation of mitotic recombination; ISS:UniProtKB.::GO:0007004; P:telomere maintenance via telomerase; ISS:UniProtKB. | 6 | Q9SL02 | 1316 | RAD50_ARATH DNA repair protein RAD50 OS=Arabi... | 1363 | 9e-131 | 441 | 29 | 50 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0030870; C:Mre11 complex; TAS:TAIR. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006302; P:double-strand break repair; IMP:TAIR.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006312; P:mitotic recombination; IMP:TAIR.::GO:0016233; P:telomere capping; IMP:TAIR. | 7 | Q9W252 | 1318 | RAD50_DROME DNA repair protein RAD50 OS=Droso... | 1358 | 8e-119 | 408 | 27 | 50 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0000793; C:condensed chromosome; IDA:UniProtKB.::GO:0030870; C:Mre11 complex; TAS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003690; F:double-stranded DNA binding; ISS:UniProtKB.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006302; P:double-strand break repair; IMP:UniProtKB.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0008104; P:protein localization; IMP:UniProtKB.::GO:0016233; P:telomere capping; IMP:FlyBase.::GO:0000722; P:telomere maintenance via recombination; IMP:UniProtKB. | 8 | Q54CS9 | 1351 | RAD50_DICDI DNA repair protein RAD50 OS=Dicty... | 388 | 1e-58 | 226 | 38 | 57 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0030870; C:Mre11 complex; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:dictyBase.::GO:0003690; F:double-stranded DNA binding; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0030674; F:protein binding, bridging; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:dictyBase. | | | | | | | | | | GO:0006310; P:DNA recombination; ISS:UniProtKB.::GO:0006303; P:double-strand break repair via nonhomologous end joining; ISS:dictyBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0000019; P:regulation of mitotic recombination; ISS:UniProtKB.::GO:0007004; P:telomere maintenance via telomerase; ISS:UniProtKB. | 9 | Q8SRK6 | 1247 | RAD50_ENCCU DNA repair protein RAD50 OS=Encep... | 230 | 2e-47 | 189 | 43 | 63 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 10 | C6KSQ6 | 2236 | RAD50_PLAF7 Probable DNA repair protein RAD50... | 241 | 3e-39 | 164 | 37 | 60 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000014; F:single-stranded DNA specific endodeoxyribonuclease activity; ISS:GeneDB_Pfalciparum. | | | | | | | | | | GO:0006302; P:double-strand break repair; ISS:GeneDB_Pfalciparum.::GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 11 | O44199 | 1298 | RAD50_CAEEL DNA repair protein rad-50 OS=Caen... | 209 | 3e-41 | 169 | 41 | 64 | GO:0030870; C:Mre11 complex; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 12 | Q96YR5 | 879 | RAD50_SULTO DNA double-strand break repair Ra... | 76 | 0.000002 | 56.2 | 37 | 58 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 13 | Q9YFZ1 | 919 | RAD50_AERPE DNA double-strand break repair Ra... | 58 | 0.1 | 40.8 | 36 | 53 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 14 | Q8TXI4 | 876 | RAD50_METKA DNA double-strand break repair Ra... | 155 | 0.005 | 45.1 | 23 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 15 | A3PMS2 | 1151 | SMC_RHOS1 Chromosome partition protein Smc OS... | 77 | 0.0003 | 49.3 | 32 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 16 | Q97WH0 | 864 | RAD50_SULSO DNA double-strand break repair Ra... | 76 | 0.001 | 47.4 | 34 | 57 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 17 | B8CW13 | 1185 | SMC_HALOH Chromosome partition protein Smc OS... | 75 | 0.001 | 47.4 | 31 | 53 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 18 | Q5JHN1 | 883 | RAD50_PYRKO DNA double-strand break repair Ra... | 206 | 3.3 | 35.8 | 25 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 19 | O33600 | 886 | RAD50_SULAC DNA double-strand break repair Ra... | 240 | 0.074 | 41.2 | 23 | 44 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 20 | A9BZW2 | 1175 | SMC_DELAS Chromosome partition protein Smc OS... | 113 | 0.003 | 45.4 | 27 | 46 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 21 | Q5H054 | 1167 | SMC_XANOR Chromosome partition protein Smc OS... | 88 | 0.009 | 44.3 | 32 | 48 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 22 | O58687 | 879 | RAD50_PYRHO DNA double-strand break repair Ra... | 90 | 0.011 | 43.9 | 31 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 23 | O83635 | 1047 | SBCC_TREPA Nuclease sbcCD subunit C OS=Trepon... | 361 | 0.013 | 43.5 | 24 | 43 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 24 | Q73VM3 | 1196 | SMC_MYCPA Chromosome partition protein Smc OS... | 190 | 0.51 | 38.5 | 25 | 43 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 25 | Q88WJ9 | 1185 | SMC_LACPL Chromosome partition protein Smc OS... | 82 | 0.014 | 43.5 | 34 | 48 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 26 | O26640 | 837 | RAD50_METTH DNA double-strand break repair Ra... | 428 | 0.016 | 43.5 | 22 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 27 | O29230 | 886 | RAD50_ARCFU DNA double-strand break repair Ra... | 102 | 1.8 | 36.6 | 32 | 44 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. | 28 | A9II65 | 1176 | SMC_BORPD Chromosome partition protein Smc OS... | 91 | 0.022 | 43.1 | 29 | 49 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 29 | E1X022 | 1226 | SMC_BACMS Chromosome partition protein Smc OS... | 73 | 0.024 | 42.7 | 33 | 51 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 30 | Q3JR19 | 1170 | SMC_BURP1 Chromosome partition protein Smc OS... | 93 | 0.025 | 42.7 | 28 | 49 | GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro. | 31 | P58301 | 882 | RAD50_PYRFU DNA double-strand break repair Ra... | 89 | 0.026 | 42.7 | 29 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW. |
