rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | A5DHT2 | 1236 | RPB2_PICGU DNA-directed RNA polymerase II sub... | 1266 | 0 | 1651 | 64 | 77 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 2 | Q02061 | 1210 | RPB2_SCHPO DNA-directed RNA polymerase II sub... | 1244 | 0 | 1631 | 63 | 78 | GO:0000775; C:chromosome, centromeric region; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:PomBase.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:PomBase. | | | | | | | | | | GO:0031048; P:chromatin silencing by small RNA; IMP:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IGI:PomBase. | 3 | P08518 | 1224 | RPB2_YEAST DNA-directed RNA polymerase II sub... | 1255 | 0 | 1605 | 62 | 76 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD. | 4 | Q6FLD5 | 1223 | RPB2_CANGA DNA-directed RNA polymerase II sub... | 1271 | 0 | 1600 | 62 | 75 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 5 | Q753Q4 | 1222 | RPB2_ASHGO DNA-directed RNA polymerase II sub... | 1248 | 0 | 1594 | 63 | 76 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 6 | P38420 | 1188 | RPB2_ARATH DNA-directed RNA polymerase II sub... | 1266 | 0 | 1401 | 56 | 71 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IPI:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 7 | Q42877 | 1191 | RPB2_SOLLC DNA-directed RNA polymerase II sub... | 1265 | 0 | 1400 | 56 | 71 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 8 | Q54J75 | 1170 | RPB2_DICDI DNA-directed RNA polymerase II sub... | 1248 | 0 | 1385 | 55 | 71 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase. | 9 | P30876 | 1174 | RPB2_HUMAN DNA-directed RNA polymerase II sub... | 1270 | 0 | 1356 | 54 | 69 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 10 | Q8CFI7 | 1174 | RPB2_MOUSE DNA-directed RNA polymerase II sub... | 1270 | 0 | 1355 | 54 | 69 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 11 | P08266 | 1176 | RPB2_DROME DNA-directed RNA polymerase II sub... | 1244 | 0 | 1338 | 54 | 69 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; NAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; NAS:UniProtKB. | 12 | Q10578 | 1193 | RPB2_CAEEL DNA-directed RNA polymerase II sub... | 1274 | 0 | 1326 | 53 | 68 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase. | 13 | Q8SR75 | 1141 | RPB2_ENCCU DNA-directed RNA polymerase II sub... | 1244 | 0 | 1294 | 53 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 14 | P31814 | 1122 | RPOB_THECE DNA-directed RNA polymerase subuni... | 1249 | 0 | 797 | 37 | 55 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 15 | P11513 | 1126 | RPOB_SULAC DNA-directed RNA polymerase subuni... | 1251 | 0 | 794 | 38 | 54 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 16 | Q03587 | 1195 | RPOB_THEAC DNA-directed RNA polymerase subuni... | 1287 | 0 | 711 | 34 | 52 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 17 | Q10233 | 1165 | RPC2_SCHPO DNA-directed RNA polymerase III su... | 1251 | 0 | 692 | 34 | 52 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; NAS:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006383; P:transcription from RNA polymerase III promoter; NAS:PomBase. | 18 | Q9NW08 | 1133 | RPC2_HUMAN DNA-directed RNA polymerase III su... | 1270 | 0 | 691 | 33 | 52 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; IMP:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome. | 19 | P59470 | 1133 | RPC2_MOUSE DNA-directed RNA polymerase III su... | 1270 | 0 | 690 | 33 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 20 | Q7T6X7 | 1196 | RPO2_MIMIV DNA-directed RNA polymerase subuni... | 1299 | 0 | 689 | 34 | 53 | GO:0019012; C:virion; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 21 | P25167 | 1137 | RPC2_DROME DNA-directed RNA polymerase III su... | 1275 | 0 | 674 | 32 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 22 | P22276 | 1149 | RPC2_YEAST DNA-directed RNA polymerase III su... | 1253 | 0 | 670 | 33 | 52 | GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD. | 23 | Q9LK40 | 1172 | RPD2A_ARATH DNA-directed RNA polymerase D sub... | 1293 | 0 | 594 | 32 | 49 | GO:0000418; C:DNA-directed RNA polymerase IV complex; IDA:UniProtKB.::GO:0000419; C:DNA-directed RNA polymerase V complex; IDA:UniProtKB.::GO:0005720; C:nuclear heterochromatin; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0006306; P:DNA methylation; IDA:TAIR.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:TAIR.::GO:0050776; P:regulation of immune response; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW. | 24 | Q9LV32 | 1119 | RPD2B_ARATH DNA-directed RNA polymerase D sub... | 37 | 2.8 | 36.2 | 35 | 65 | GO:0000418; C:DNA-directed RNA polymerase IV complex; ISS:UniProtKB.::GO:0000419; C:DNA-directed RNA polymerase V complex; ISS:UniProtKB.::GO:0016020; C:membrane; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW. | 25 | Q197F1 | 1140 | RPB2_IIV3 Probable DNA-directed RNA polymeras... | 1278 | 1e-173 | 553 | 32 | 48 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 26 | Q91F97 | 1193 | RPB2_IIV6 Probable DNA-directed RNA polymeras... | 1301 | 2e-169 | 543 | 31 | 48 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | | 27 | O27124 | 603 | RPOB1_METTH DNA-directed RNA polymerase subun... | 661 | 4e-168 | 520 | 41 | 59 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 28 | P09845 | 604 | RPOB1_METTW DNA-directed RNA polymerase subun... | 659 | 1e-164 | 511 | 41 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 29 | Q60181 | 636 | RPOB1_METJA DNA-directed RNA polymerase subun... | 659 | 1e-158 | 496 | 42 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | P0CX03 | 608 | RPOB1_HALSA DNA-directed RNA polymerase subun... | 657 | 1e-155 | 488 | 39 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | B0R8D5 | 608 | RPOB1_HALS3 DNA-directed RNA polymerase subun... | 657 | 1e-155 | 488 | 39 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |