| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
151 | P05892 | 519 | GAG_SIVVT Gag polyprotein OS=vervet). GN=gag ... | 42 | 0.17 | 36.6 | 40 | 57 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 152 | Q9NUD5 | 404 | ZCHC3_HUMAN Zinc finger CCHC domain-containin... | 75 | 0.002 | 42.7 | 33 | 47 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 153 | P27978 | 521 | GAG_SIVVG Gag polyprotein OS=(Simian immunode... | 42 | 0.008 | 40.8 | 45 | 57 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 154 | Q9HFF2 | 218 | YL92_SCHPO Uncharacterized protein C683.02c O... | 122 | 0.57 | 34.7 | 23 | 34 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 155 | P27972 | 520 | GAG_SIVV1 Gag polyprotein OS=vervet). GN=gag ... | 42 | 0.027 | 39.3 | 43 | 57 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 156 | B1WC15 | 542 | ZCHC7_RAT Zinc finger CCHC domain-containing ... | 122 | 0.64 | 35 | 24 | 34 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 157 | P31634 | 510 | GAG_SIVMS Gag polyprotein OS=immunodeficiency... | 94 | 1.7 | 33.5 | 30 | 39 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 158 | Q8NIW7 | 607 | BBP_NEUCR Branchpoint-bridging protein OS=125... | 50 | 1.5 | 33.9 | 38 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 159 | P04023 | 572 | GAG_IPHA Retrovirus-related Gag polyprotein O... | 72 | 0.91 | 34.7 | 28 | 40 | GO:0019028; C:viral capsid; IEA:InterPro. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 160 | Q4WXV6 | 566 | BBP_ASPFU Branchpoint-bridging protein OS=A11... | 50 | 0.32 | 35.8 | 38 | 50 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 161 | P05893 | 506 | GAG_SIVMK Gag polyprotein OS=immunodeficiency... | 50 | 0.53 | 35.4 | 38 | 54 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 162 | P69732 | 486 | GAG_EIAVY Gag polyprotein OS=Equine infectiou... | 27 | 5.5 | 32 | 56 | 67 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 163 | P69731 | 486 | GAG_EIAVC Gag polyprotein OS=Equine infectiou... | 27 | 5.5 | 32 | 56 | 67 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 164 | P69730 | 486 | GAG_EIAV9 Gag polyprotein OS=Equine infectiou... | 27 | 5.5 | 32 | 56 | 67 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 165 | B1AX39 | 541 | ZCHC7_MOUSE Zinc finger CCHC domain-containin... | 144 | 2 | 33.5 | 23 | 35 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 166 | P27484 | 214 | GRP2_NICSY Glycine-rich protein 2 OS=Nicotian... | 16 | 5.5 | 31.6 | 63 | 88 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. | 167 | Q9P795 | 313 | AIR1_SCHPO Protein air1 OS=Schizosaccharomyce... | 131 | 0.079 | 37.7 | 26 | 34 | GO:0005730; C:nucleolus; ISS:PomBase.::GO:0031499; C:TRAMP complex; IDA:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0016075; P:rRNA catabolic process; ISS:PomBase.::GO:0016077; P:snoRNA catabolic process; ISS:PomBase.::GO:0016076; P:snRNA catabolic process; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase. | 168 | Q803L0 | 202 | LN28A_DANRE Protein lin-28 homolog A OS=Danio... | 39 | 0.16 | 36.2 | 38 | 62 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB. | 169 | P11283 | 1755 | POL_MMTVC Gag-Pro-Pol polyprotein OS=Mouse ma... | 24 | 0.31 | 36.2 | 46 | 67 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro. | 170 | P05894 | 506 | GAG_SIVM1 Gag polyprotein OS=immunodeficiency... | 51 | 1.1 | 34.3 | 41 | 53 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 171 | Q9IZT2 | 860 | PRO_MMTVC Gag-Pro polyprotein OS=Mouse mammar... | 24 | 0.37 | 35.8 | 46 | 67 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 172 | Q8N3Z6 | 543 | ZCHC7_HUMAN Zinc finger CCHC domain-containin... | 122 | 2.8 | 33.1 | 25 | 32 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 173 | P03353 | 602 | PRO_HTLV2 Gag-Pro polyprotein OS=Human T-cell... | 60 | 0.035 | 38.9 | 37 | 45 | GO:0019013; C:viral nucleocapsid; IEA:InterPro. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 174 | P92186 | 227 | LIN28_CAEEL Protein lin-28 OS=Caenorhabditis ... | 52 | 0.037 | 38.1 | 37 | 58 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:WormBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0070883; F:pre-miRNA binding; IPI:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001708; P:cell fate specification; IMP:UniProtKB.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040034; P:regulation of development, heterochronic; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. | 175 | P03346 | 433 | GAG_HTLV2 Gag polyprotein OS=Human T-cell leu... | 60 | 0.043 | 38.5 | 37 | 45 | GO:0019013; C:viral nucleocapsid; IEA:InterPro. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 176 | P91599 | 214 | LIN28_CAERE Protein lin-28 OS=Caenorhabditis ... | 52 | 0.045 | 38.1 | 37 | 58 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001708; P:cell fate specification; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. | 177 | O74555 | 587 | BBP_SCHPO Branchpoint-bridging protein OS=Sch... | 69 | 8.3 | 31.6 | 30 | 38 | GO:0000243; C:commitment complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000349; P:generation of catalytic spliceosome for first transesterification step; IDA:PomBase. | 178 | Q6IQ97 | 419 | RBM41_DANRE RNA-binding protein 4.1 OS=Danio ... | 97 | 0.074 | 37.7 | 33 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 179 | O92954 | 701 | GAG_RSVSB Gag-Pro polyprotein OS=Rous sarcoma... | 57 | 1.4 | 33.9 | 42 | 47 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 180 | P31821 | 449 | GAG_FIVT2 Gag polyprotein OS=Feline immunodef... | 75 | 5.9 | 32 | 29 | 44 | GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW. | 181 | B2RX14 | 1644 | TUT4_MOUSE Terminal uridylyltransferase 4 OS=... | 71 | 2.8 | 33.1 | 28 | 48 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0050265; F:RNA uridylyltransferase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001816; P:cytokine production; IDA:MGI.::GO:0070102; P:interleukin-6-mediated signaling pathway; IMP:UniProtKB.::GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IDA:MGI.::GO:0032755; P:positive regulation of interleukin-6 production; IMP:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0031664; P:regulation of lipopolysaccharide-mediated signaling pathway; IDA:MGI.::GO:0031123; P:RNA 3'-end processing; IDA:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB. |
