rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q750X3 | 683 | CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Y... | 156 | 0.041 | 40 | 25 | 42 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 32 | P87312 | 674 | CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=S... | 218 | 2.4 | 34.7 | 23 | 43 | GO:0005681; C:spliceosomal complex; IDA:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase. | 33 | Q527H0 | 691 | CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=b... | 178 | 1.8 | 35 | 24 | 41 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 34 | Q54XP4 | 705 | CRNL1_DICDI Crooked neck-like protein 1 OS=Di... | 163 | 9.6 | 32.7 | 21 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 35 | Q5RDW9 | 717 | CSTF3_PONAB Cleavage stimulation factor subun... | 219 | 0.09 | 39.3 | 22 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 36 | Q12996 | 717 | CSTF3_HUMAN Cleavage stimulation factor subun... | 219 | 0.1 | 38.9 | 22 | 43 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 37 | Q99LI7 | 717 | CSTF3_MOUSE Cleavage stimulation factor subun... | 219 | 0.097 | 38.9 | 22 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 38 | Q14690 | 1871 | RRP5_HUMAN Protein RRP5 homolog OS=Homo sapie... | 247 | 0.13 | 38.9 | 20 | 40 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 39 | B2J353 | 235 | THF1_NOSP7 Protein thf1 OS=Nostoc punctiforme... | 102 | 0.37 | 36.2 | 27 | 48 | GO:0009523; C:photosystem II; IEA:InterPro. | | | | | | | | | | | | | | | | | | | | GO:0015979; P:photosynthesis; IEA:InterPro.::GO:0010027; P:thylakoid membrane organization; IEA:InterPro. | 40 | Q57711 | 338 | Y941_METJA TPR repeat-containing protein MJ09... | 81 | 0.59 | 36.2 | 28 | 51 | | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | | 41 | Q07563 | 1470 | COHA1_MOUSE Collagen alpha-1(XVII) chain OS=M... | 85 | 1 | 35.8 | 29 | 48 | GO:0005604; C:basement membrane; IEA:UniProtKB-SubCell.::GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0030056; C:hemidesmosome; IDA:MGI.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | GO:0031581; P:hemidesmosome assembly; ISS:UniProtKB. | 42 | P49461 | 425 | SECY_ODOSI Protein translocase subunit SecY O... | 54 | 1 | 35.4 | 35 | 59 | GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0015450; F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity; IEA:InterPro. | | | | | | | | | | | 43 | P17886 | 702 | CRN_DROME Protein crooked neck OS=Drosophila ... | 194 | 2.1 | 34.7 | 24 | 44 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005813; C:centrosome; IDA:FlyBase.::GO:0072686; C:mitotic spindle; IDA:FlyBase.::GO:0016607; C:nuclear speck; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0008366; P:axon ensheathment; IMP:FlyBase.::GO:0051298; P:centrosome duplication; IMP:FlyBase.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0007443; P:Malpighian tubule morphogenesis; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0007438; P:oenocyte development; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 44 | Q6NS46 | 1862 | RRP5_MOUSE Protein RRP5 homolog OS=Mus muscul... | 247 | 1.1 | 35.8 | 20 | 39 | GO:0005829; C:cytosol; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; TAS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 45 | Q9WX63 | 1325 | BCSC3_GLUXY Cellulose synthase 1 operon prote... | 185 | 1.3 | 35.4 | 25 | 40 | GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042802; F:identical protein binding; IEA:InterPro. | | | | | | | | | | GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.::GO:0006011; P:UDP-glucose metabolic process; IEA:InterPro. | 46 | Q4P7S1 | 1081 | SYF1_USTMA Pre-mRNA-splicing factor SYF1 OS=U... | 235 | 1.6 | 35 | 21 | 38 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 47 | Q9ZCY1 | 149 | MRAZ_RICPR Protein MraZ OS=Rickettsia prowaze... | 117 | 2.2 | 33.1 | 26 | 49 | | | | | | | | | | | | | | | | | | | | | | 48 | Q5AM44 | 791 | RNA14_CANAL mRNA 3'-end-processing protein RN... | 318 | 2.6 | 34.3 | 20 | 34 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 49 | Q5M6W3 | 596 | CB063_MOUSE Uncharacterized protein C2orf63 h... | 152 | 3.2 | 33.9 | 24 | 42 | | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | | 50 | A7MB10 | 1874 | RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus... | 243 | 4.2 | 33.9 | 20 | 39 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 51 | Q00134 | 151 | VG10_ICHVA Putative membrane protein ORF10 OS... | 70 | 4.9 | 32.3 | 34 | 50 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 52 | Q9DCD2 | 855 | SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=M... | 107 | 4.9 | 33.5 | 29 | 40 | | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0001824; P:blastocyst development; IMP:MGI.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB. | 53 | Q54Z08 | 850 | SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=D... | 258 | 5 | 33.5 | 20 | 40 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 54 | Q12381 | 906 | PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=S... | 133 | 5.1 | 33.5 | 25 | 43 | GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase. | 55 | Q99PK0 | 855 | SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rat... | 107 | 5.2 | 33.5 | 29 | 40 | | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; ISS:UniProtKB. | 56 | Q9HCS7 | 855 | SYF1_HUMAN Pre-mRNA-splicing factor SYF1 OS=H... | 107 | 5.2 | 33.5 | 29 | 40 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IDA:UniProtKB. | 57 | Q6CAR6 | 736 | SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=l... | 74 | 5.6 | 33.5 | 28 | 45 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 58 | Q87C33 | 269 | HIS4_XYLFT 1-(5-phosphoribosyl)-5-[(5-phospho... | 52 | 6.9 | 32.7 | 37 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003949; F:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneaminoimidazole-4-carboxamide isomerase activity; IEA:EC. | | | | | | | | | | GO:0000105; P:histidine biosynthetic process; IEA:UniProtKB-KW.] | 59 | B2I5X7 | 269 | HIS4_XYLF2 1-(5-phosphoribosyl)-5-[(5-phospho... | 52 | 6.9 | 32.7 | 37 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003949; F:1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneaminoimidazole-4-carboxamide isomerase activity; IEA:EC. | | | | | | | | | | GO:0000105; P:histidine biosynthetic process; IEA:UniProtKB-KW.] | 60 | P0CO08 | 1031 | SYF1_CRYNJ Pre-mRNA-splicing factor SYF1 OS=A... | 254 | 9.8 | 32.7 | 24 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 61 | P0CO09 | 1031 | SYF1_CRYNB Pre-mRNA-splicing factor SYF1 OS=(... | 254 | 9.8 | 32.7 | 24 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |