| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74970 | 612 | PRP39_SCHPO Pre-mRNA-processing factor 39 OS=... | 480 | 7e-130 | 396 | 43 | 60 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase. | 2 | Q1JPZ7 | 752 | PRP39_DANRE Pre-mRNA-processing factor 39 OS=... | 298 | 7e-47 | 177 | 34 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 3 | Q86UA1 | 669 | PRP39_HUMAN Pre-mRNA-processing factor 39 OS=... | 287 | 9e-45 | 170 | 33 | 53 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | Q4KLU2 | 641 | PRP39_XENLA Pre-mRNA-processing factor 39 OS=... | 332 | 1e-44 | 170 | 31 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 5 | Q8K2Z2 | 665 | PRP39_MOUSE Pre-mRNA-processing factor 39 OS=... | 287 | 5e-41 | 159 | 32 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 6 | Q7KRW8 | 1066 | PRP39_DROME Pre-mRNA-processing factor 39 OS=... | 60 | 1 | 35.8 | 33 | 50 | GO:0005685; C:U1 snRNP; ISS:FlyBase. | | | | | | | | | | GO:0031072; F:heat shock protein binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 7 | P39682 | 629 | PRP39_YEAST Pre-mRNA-processing factor 39 OS=... | 247 | 6e-25 | 111 | 26 | 47 | GO:0000243; C:commitment complex; IGI:SGD.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IGI:SGD. | 8 | Q03776 | 544 | PRP42_YEAST U1 small nuclear ribonucleoprotei... | 222 | 0.000000005 | 62 | 21 | 46 | GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD. | 9 | Q9JLI8 | 962 | SART3_MOUSE Squamous cell carcinoma antigen r... | 64 | 0.00008 | 48.9 | 34 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 10 | Q15020 | 963 | SART3_HUMAN Squamous cell carcinoma antigen r... | 64 | 0.0001 | 48.5 | 34 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 11 | Q5REG1 | 981 | SART3_PONAB Squamous cell carcinoma antigen r... | 64 | 0.0001 | 48.5 | 34 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 12 | Q6CJK2 | 684 | CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=1... | 196 | 0.0003 | 47 | 27 | 40 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 13 | P0CO10 | 726 | CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=A... | 59 | 1.1 | 35.4 | 39 | 51 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 14 | P0CO11 | 726 | CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=(... | 59 | 1.1 | 35.4 | 39 | 51 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 15 | Q9BZJ0 | 848 | CRNL1_HUMAN Crooked neck-like protein 1 OS=Ho... | 277 | 0.001 | 45.1 | 23 | 42 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB. | 16 | Q12309 | 687 | CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=S... | 171 | 0.001 | 45.1 | 26 | 43 | GO:0000785; C:chromatin; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000354; P:cis assembly of pre-catalytic spliceosome; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD. | 17 | Q9HF03 | 724 | CLF1_CRYNV Pre-mRNA-splicing factor CLF1 OS=g... | 59 | 1.1 | 35.4 | 39 | 51 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 18 | Q5AED6 | 758 | CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=C... | 157 | 0.002 | 44.3 | 26 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 19 | P63155 | 690 | CRNL1_RAT Crooked neck-like protein 1 OS=Ratt... | 277 | 0.003 | 43.9 | 23 | 41 | | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 20 | P63154 | 690 | CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu... | 277 | 0.003 | 43.9 | 23 | 41 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 21 | Q6C186 | 676 | CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=l... | 82 | 6.1 | 33.1 | 23 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 22 | Q5K654 | 677 | CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=P... | 267 | 7.3 | 32.7 | 21 | 39 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 23 | Q9FNS4 | 662 | MBB1_CHLRE PsbB mRNA maturation factor Mbb1, ... | 195 | 0.012 | 42 | 22 | 43 | GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 24 | Q4WT84 | 676 | CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=A... | 229 | 6 | 33.1 | 21 | 42 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 25 | Q6FW76 | 695 | CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N... | 170 | 0.016 | 41.6 | 29 | 41 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 26 | Q54VF4 | 1304 | Y8236_DICDI TPR-containing protein DDB_G02803... | 104 | 0.016 | 41.6 | 33 | 49 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 27 | Q5BDX1 | 673 | CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=1... | 346 | 5.5 | 33.5 | 24 | 37 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 28 | Q7SGD2 | 695 | CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=... | 258 | 0.018 | 41.2 | 23 | 41 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 29 | Q6BSP7 | 714 | CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=0... | 175 | 0.03 | 40.8 | 22 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 30 | Q4PB37 | 781 | CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=U... | 47 | 5.2 | 33.5 | 36 | 57 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 31 | Q750X3 | 683 | CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Y... | 156 | 0.041 | 40 | 25 | 42 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |
