rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P55034 | 386 | PSMD4_ARATH 26S proteasome non-ATPase regulat... | 299 | 2e-66 | 219 | 44 | 60 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005634; C:nucleus; TAS:TAIR.::GO:0000502; C:proteasome complex; IDA:TAIR. | | | | | | | | | | GO:0001653; F:peptide receptor activity; IDA:TAIR. | | | | | | | | | | GO:0010150; P:leaf senescence; IMP:TAIR.::GO:0009555; P:pollen development; IMP:TAIR.::GO:0048528; P:post-embryonic root development; IMP:TAIR.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:TAIR.::GO:0043248; P:proteasome assembly; IMP:TAIR.::GO:0010029; P:regulation of seed germination; IMP:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IMP:TAIR.::GO:0009733; P:response to auxin stimulus; IMP:TAIR.::GO:0009735; P:response to cytokinin stimulus; IEP:TAIR.::GO:0006974; P:response to DNA damage stimulus; IMP:TAIR.::GO:0009408; P:response to heat; IMP:TAIR.::GO:0051788; P:response to misfolded protein; IMP:TAIR.::GO:0009651; P:response to salt stress; IMP:TAIR.::GO:0009744; P:response to sucrose stimulus; IMP:TAIR.::GO:0048767; P:root hair elongation; IMP:TAIR.::GO:0048455; P:stamen formation; IMP:TAIR. | 2 | O94444 | 243 | RPN10_SCHPO 26S proteasome regulatory subunit... | 257 | 3e-65 | 211 | 46 | 61 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:PomBase. | | | | | | | | | | | | | | | | | | | | GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase. | 3 | P38886 | 268 | RPN10_YEAST 26S proteasome regulatory subunit... | 242 | 1e-64 | 210 | 48 | 63 | GO:0008540; C:proteasome regulatory particle, base subcomplex; IDA:SGD. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; IDA:SGD.::GO:0005198; F:structural molecule activity; IMP:SGD. | | | | | | | | | | GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD. | 4 | P55036 | 377 | PSMD4_HUMAN 26S proteasome non-ATPase regulat... | 242 | 1e-57 | 196 | 49 | 60 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; TAS:ProtInc. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0042981; P:regulation of apoptotic process; TAS:Reactome.::GO:0006521; P:regulation of cellular amino acid metabolic process; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 5 | O35226 | 376 | PSMD4_MOUSE 26S proteasome non-ATPase regulat... | 242 | 1e-57 | 196 | 49 | 60 | GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 6 | Q58DA0 | 382 | PSMD4_BOVIN 26S proteasome non-ATPase regulat... | 242 | 1e-57 | 196 | 49 | 60 | GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 7 | Q553E0 | 349 | PSMD4_DICDI 26S proteasome non-ATPase regulat... | 258 | 8e-57 | 192 | 44 | 62 | GO:0005634; C:nucleus; ISS:dictyBase.::GO:0000502; C:proteasome complex; ISS:dictyBase. | | | | | | | | | | GO:0004175; F:endopeptidase activity; ISS:dictyBase. | | | | | | | | | | GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase. | 8 | P55035 | 396 | PSMD4_DROME 26S proteasome non-ATPase regulat... | 254 | 3e-50 | 176 | 45 | 58 | GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:FlyBase. | | | | | | | | | | GO:0004175; F:endopeptidase activity; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007059; P:chromosome segregation; IMP:FlyBase.::GO:0006508; P:proteolysis; IDA:FlyBase.::GO:0006974; P:response to DNA damage stimulus; IMP:FlyBase. | 9 | O17453 | 420 | PSMD4_SCHMA 26S proteasome non-ATPase regulat... | 251 | 1e-49 | 176 | 43 | 58 | GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 10 | A2A3N6 | 862 | PIPSL_HUMAN Putative PIP5K1A and PSMD4-like p... | 240 | 7e-47 | 173 | 46 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016307; F:phosphatidylinositol phosphate kinase activity; IEA:InterPro. | | | | | | | | | | | 11 | Q13888 | 395 | TF2H2_HUMAN General transcription factor IIH ... | 122 | 0.005 | 42 | 25 | 39 | GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. | | | | | | | | | | GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:ProtInc.::GO:0008135; F:translation factor activity, nucleic acid binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0002031; P:G-protein coupled receptor internalization; IMP:UniProtKB.::GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0009411; P:response to UV; TAS:ProtInc.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 12 | Q2TBV5 | 395 | TF2H2_BOVIN General transcription factor IIH ... | 147 | 0.007 | 41.6 | 23 | 38 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 13 | A0JN27 | 396 | TF2H2_RAT General transcription factor IIH su... | 147 | 0.008 | 41.2 | 23 | 38 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 14 | Q9JIB4 | 396 | TF2H2_MOUSE General transcription factor IIH ... | 122 | 0.011 | 40.8 | 25 | 39 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 15 | Q6P1K8 | 395 | T2H2L_HUMAN General transcription factor IIH ... | 122 | 0.017 | 40 | 25 | 39 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 16 | A4T9I4 | 335 | Y3659_MYCGI UPF0353 protein Mflv_3659 OS=(str... | 65 | 0.82 | 34.7 | 37 | 52 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 17 | O07395 | 335 | Y335_MYCAV UPF0353 protein MAV335 OS=Mycobact... | 64 | 1.3 | 34.3 | 38 | 53 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 18 | Q740Y5 | 335 | Y1207_MYCPA UPF0353 protein MAP_1207 OS=Mycob... | 64 | 1.3 | 34.3 | 38 | 53 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 19 | A1T8Q8 | 335 | Y2751_MYCVP UPF0353 protein Mvan_2751 OS=Myco... | 65 | 1.5 | 33.9 | 37 | 52 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 20 | Q24498 | 5127 | RY44_DROME Ryanodine receptor 44F OS=Drosophi... | 81 | 1.5 | 34.3 | 31 | 48 | GO:0016021; C:integral to membrane; NAS:UniProtKB.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0033017; C:sarcoplasmic reticulum membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005219; F:ryanodine-sensitive calcium-release channel activity; TAS:UniProtKB. | | | | | | | | | | GO:0006874; P:cellular calcium ion homeostasis; IEA:InterPro.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006936; P:muscle contraction; IMP:UniProtKB. | 21 | A8MDY8 | 415 | LEUC_CALMQ 3-isopropylmalate dehydratase larg... | 86 | 1.5 | 33.9 | 29 | 44 | | | | | | | | | | | GO:0003861; F:3-isopropylmalate dehydratase activity; IEA:EC.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009098; P:leucine biosynthetic process; IEA:UniProtKB-KW. | 22 | P34567 | 376 | TF2H2_CAEEL General transcription factor IIH ... | 100 | 2.4 | 33.5 | 24 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 23 | Q6LTV9 | 828 | NAPA1_PHOPR Periplasmic nitrate reductase 1 O... | 53 | 5.6 | 32.3 | 30 | 51 | GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0030151; F:molybdenum ion binding; IEA:InterPro.::GO:0008940; F:nitrate reductase activity; IEA:EC. | | | | | | | | | | GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW. | 24 | Q9DBY8 | 855 | NVL_MOUSE Nuclear valosin-containing protein-... | 87 | 9.4 | 31.6 | 30 | 48 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. | | | | | | | | | | |