rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
391 | Q3KGV8 | 948 | RAPA_PSEPF RNA polymerase-associated protein ... | 119 | 0.24 | 39.7 | 25 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 392 | B1J1F5 | 948 | RAPA_PSEPW RNA polymerase-associated protein ... | 119 | 0.25 | 39.7 | 26 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 393 | Q9BZY9 | 425 | TRI31_HUMAN E3 ubiquitin-protein ligase TRIM3... | 60 | 0.27 | 39.3 | 30 | 42 | GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 394 | Q58D15 | 366 | TRI54_BOVIN Tripartite motif-containing prote... | 62 | 0.27 | 38.9 | 31 | 45 | GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 395 | Q4QMI0 | 923 | RAPA_HAEI8 RNA polymerase-associated protein ... | 89 | 0.27 | 39.3 | 29 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 396 | Q5RAK3 | 592 | RN180_PONAB E3 ubiquitin-protein ligase RNF18... | 67 | 0.29 | 39.3 | 31 | 45 | GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 397 | Q810I2 | 483 | TRI50_MOUSE E3 ubiquitin-protein ligase TRIM5... | 64 | 0.32 | 38.9 | 27 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 398 | Q6AZZ1 | 485 | TRI68_HUMAN E3 ubiquitin-protein ligase TRIM6... | 70 | 0.32 | 38.9 | 30 | 40 | GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0050681; F:androgen receptor binding; IPI:UniProtKB.::GO:0035035; F:histone acetyltransferase binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0060765; P:regulation of androgen receptor signaling pathway; IDA:UniProtKB. | 399 | Q62158 | 513 | TRI27_MOUSE Zinc finger protein RFP OS=Mus mu... | 65 | 0.32 | 38.9 | 31 | 43 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0072643; P:interferon-gamma secretion; ISS:UniProtKB.::GO:0002820; P:negative regulation of adaptive immune response; ISS:UniProtKB.::GO:0090281; P:negative regulation of calcium ion import; ISS:UniProtKB.::GO:1900041; P:negative regulation of interleukin-2 secretion; ISS:UniProtKB.::GO:0006469; P:negative regulation of protein kinase activity; ISS:UniProtKB.::GO:0032720; P:negative regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 400 | Q48LP5 | 948 | RAPA_PSE14 RNA polymerase-associated protein ... | 119 | 0.36 | 38.9 | 25 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 401 | Q8GUK7 | 243 | RMA3_ARATH E3 ubiquitin-protein ligase RMA3 O... | 107 | 0.38 | 38.1 | 29 | 38 | GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 402 | Q4ZPQ0 | 948 | RAPA_PSEU2 RNA polymerase-associated protein ... | 119 | 0.38 | 38.9 | 25 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 403 | Q6R567 | 252 | RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1... | 92 | 0.39 | 38.1 | 27 | 42 | GO:0005789; C:endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0009409; P:response to cold; IEP:UniProtKB.::GO:0009723; P:response to ethylene stimulus; IEP:UniProtKB.::GO:0006970; P:response to osmotic stress; IEP:UniProtKB.::GO:0009414; P:response to water deprivation; IEP:UniProtKB.::GO:0009611; P:response to wounding; IEP:UniProtKB. | 404 | Q5XIH6 | 364 | TRI54_RAT Tripartite motif-containing protein... | 62 | 0.42 | 38.5 | 31 | 45 | GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 405 | Q8C0E3 | 641 | TRI47_MOUSE Tripartite motif-containing prote... | 31 | 0.43 | 38.5 | 45 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 406 | Q5BK82 | 499 | TRI69_RAT Tripartite motif-containing protein... | 76 | 0.46 | 38.5 | 29 | 41 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW. | 407 | Q9BYV2 | 358 | TRI54_HUMAN Tripartite motif-containing prote... | 62 | 0.46 | 38.1 | 31 | 45 | GO:0005874; C:microtubule; NAS:UniProtKB.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004871; F:signal transducer activity; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007017; P:microtubule-based process; NAS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; NAS:UniProtKB. | 408 | Q503I2 | 404 | TRI13_DANRE Tripartite motif-containing 13 OS... | 61 | 0.47 | 38.1 | 33 | 41 | GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 409 | Q9ERP3 | 366 | TRI54_MOUSE Tripartite motif-containing prote... | 62 | 0.48 | 38.1 | 31 | 45 | GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; IDA:MGI.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008017; F:microtubule binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; IDA:MGI. | 410 | Q5ZIR9 | 194 | RN185_CHICK E3 ubiquitin-protein ligase RNF18... | 76 | 0.48 | 37.4 | 30 | 38 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006914; P:autophagy; IEA:UniProtKB-KW. | 411 | Q5REJ9 | 358 | TRI54_PONAB Tripartite motif-containing prote... | 62 | 0.48 | 38.1 | 31 | 45 | GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 412 | Q9P3U8 | 468 | YJ95_SCHPO Uncharacterized RING finger protei... | 67 | 0.49 | 38.5 | 31 | 42 | GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0034080; P:CenH3-containing nucleosome assembly at centromere; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase. | 413 | Q3U827 | 592 | RN180_MOUSE E3 ubiquitin-protein ligase RNF18... | 67 | 0.49 | 38.5 | 31 | 43 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031227; C:intrinsic to endoplasmic reticulum membrane; IDA:MGI.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0031624; F:ubiquitin conjugating enzyme binding; IDA:MGI.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:MGI. | 414 | Q11072 | 218 | YT44_CAEEL Uncharacterized RING finger protei... | 77 | 0.5 | 37.4 | 35 | 44 | | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 415 | Q96LD4 | 638 | TRI47_HUMAN Tripartite motif-containing prote... | 31 | 0.5 | 38.5 | 45 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 416 | Q9I8X5 | 313 | SIAH2_XENLA E3 ubiquitin-protein ligase siah2... | 32 | 0.5 | 38.1 | 41 | 63 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 417 | Q13049 | 653 | TRI32_HUMAN E3 ubiquitin-protein ligase TRIM3... | 47 | 0.5 | 38.5 | 36 | 62 | GO:0005634; C:nucleus; ISS:BHF-UCL. | | | | | | | | | | GO:0017022; F:myosin binding; ISS:BHF-UCL.::GO:0043621; F:protein self-association; IDA:UniProtKB.::GO:0003723; F:RNA binding; ISS:BHF-UCL.::GO:0030957; F:Tat protein binding; TAS:BHF-UCL.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.::GO:0031369; F:translation initiation factor binding; ISS:BHF-UCL.::GO:0043130; F:ubiquitin binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045444; P:fat cell differentiation; ISS:BHF-UCL.::GO:0045087; P:innate immune response; TAS:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; IDA:BHF-UCL.::GO:0048147; P:negative regulation of fibroblast proliferation; ISS:BHF-UCL.::GO:0045787; P:positive regulation of cell cycle; IDA:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; IDA:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; IDA:BHF-UCL.::GO:0050769; P:positive regulation of neurogenesis; ISS:BHF-UCL.::GO:0045666; P:positive regulation of neuron differentiation; ISS:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; ISS:BHF-UCL.::GO:0045862; P:positive regulation of proteolysis; IDA:BHF-UCL.::GO:0000209; P:protein polyubiquitination; IDA:BHF-UCL.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0034612; P:response to tumor necrosis factor; ISS:BHF-UCL.::GO:0009411; P:response to UV; ISS:BHF-UCL. | 418 | B0URM0 | 966 | RAPA_HAES2 RNA polymerase-associated protein ... | 140 | 0.51 | 38.5 | 25 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 419 | Q864U1 | 1849 | BRCA1_BOVIN Breast cancer type 1 susceptibili... | 102 | 0.52 | 38.5 | 25 | 46 | GO:0031436; C:BRCA1-BARD1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0085020; P:protein K6-linked ubiquitination; ISS:UniProtKB. | 420 | C3K902 | 948 | RAPA_PSEFS RNA polymerase-associated protein ... | 119 | 0.53 | 38.5 | 24 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 421 | Q8CH72 | 655 | TRI32_MOUSE E3 ubiquitin-protein ligase TRIM3... | 47 | 0.57 | 38.1 | 36 | 62 | GO:0005737; C:cytoplasm; ISS:BHF-UCL.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0017022; F:myosin binding; IPI:MGI.::GO:0043621; F:protein self-association; ISS:BHF-UCL.::GO:0003723; F:RNA binding; IDA:BHF-UCL.::GO:0031369; F:translation initiation factor binding; IPI:MGI.::GO:0043130; F:ubiquitin binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045444; P:fat cell differentiation; IEP:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; ISS:BHF-UCL.::GO:0048147; P:negative regulation of fibroblast proliferation; IEP:BHF-UCL.::GO:0045787; P:positive regulation of cell cycle; ISS:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; ISS:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; ISS:BHF-UCL.::GO:0050769; P:positive regulation of neurogenesis; IDA:BHF-UCL.::GO:0045666; P:positive regulation of neuron differentiation; IDA:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IDA:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; IDA:BHF-UCL.::GO:0045862; P:positive regulation of proteolysis; ISS:BHF-UCL.::GO:0000209; P:protein polyubiquitination; ISS:BHF-UCL.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; ISS:BHF-UCL.::GO:0034612; P:response to tumor necrosis factor; IDA:BHF-UCL.::GO:0009411; P:response to UV; IDA:BHF-UCL. |