| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q9VSH4 | 652 | CPSF6_DROME Cleavage and polyadenylation spec... | 113 | 0.0000003 | 56.2 | 35 | 52 | GO:0005849; C:mRNA cleavage factor complex; ISS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 2 | Q6DDW4 | 548 | CPSF6_XENLA Cleavage and polyadenylation spec... | 64 | 0.0002 | 47.4 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 3 | Q6NWC6 | 545 | CPSF6_DANRE Cleavage and polyadenylation spec... | 64 | 0.0003 | 47 | 36 | 56 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 4 | Q5ZL34 | 551 | CPSF6_CHICK Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 5 | Q6NVF9 | 551 | CPSF6_MOUSE Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 6 | Q16630 | 551 | CPSF6_HUMAN Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB.::GO:0042382; C:paraspeckles; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:MGI. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0051262; P:protein tetramerization; IDA:UniProtKB. | 7 | Q0P5D2 | 551 | CPSF6_BOVIN Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 8 | Q8BTV2 | 471 | CPSF7_MOUSE Cleavage and polyadenylation spec... | 58 | 0.005 | 42.7 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 9 | Q8N684 | 471 | CPSF7_HUMAN Cleavage and polyadenylation spec... | 58 | 0.005 | 42.7 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0051262; P:protein tetramerization; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 10 | Q5XI29 | 462 | CPSF7_RAT Cleavage and polyadenylation specif... | 58 | 0.005 | 42.7 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 11 | O94432 | 474 | YHKF_SCHPO Uncharacterized RNA-binding protei... | 96 | 0.031 | 40 | 25 | 45 | GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; NAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase. | 12 | A7TKW4 | 1202 | SLA1_VANPO Actin cytoskeleton-regulatory comp... | 62 | 0.1 | 38.9 | 37 | 45 | GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IEA:InterPro.::GO:0030674; F:protein binding, bridging; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IEA:InterPro. | | | | | | | | | | GO:0006897; P:endocytosis; IEA:UniProtKB-KW. | 13 | Q5NVH8 | 552 | CPSF6_PONAB Cleavage and polyadenylation spec... | 49 | 0.12 | 38.5 | 35 | 61 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 14 | P98175 | 930 | RBM10_HUMAN RNA-binding protein 10 OS=Homo sa... | 88 | 0.91 | 35.8 | 27 | 55 | GO:0016585; C:chromatin remodeling complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 15 | Q99KG3 | 930 | RBM10_MOUSE RNA-binding protein 10 OS=Mus mus... | 88 | 0.95 | 35.8 | 27 | 55 | GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 16 | O48686 | 1330 | SNL3_ARATH Paired amphipathic helix protein S... | 74 | 1.2 | 35.4 | 28 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 17 | Q9R0G8 | 1455 | NRK_MOUSE Nik-related protein kinase OS=Mus m... | 92 | 3.7 | 33.9 | 32 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro. | | | | | | | | | | GO:0007256; P:activation of JNKK activity; IDA:MGI.::GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.::GO:0007567; P:parturition; IMP:MGI.::GO:0060721; P:regulation of spongiotrophoblast cell proliferation; IMP:MGI. | 18 | Q9PU36 | 5120 | PCLO_CHICK Protein piccolo OS=Gallus gallus (... | 207 | 4.3 | 33.9 | 23 | 36 | GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0045202; C:synapse; ISS:UniProtKB. | | | | | | | | | | GO:0005509; F:calcium ion binding; ISS:UniProtKB.::GO:0005544; F:calcium-dependent phospholipid binding; ISS:UniProtKB.::GO:0005522; F:profilin binding; ISS:UniProtKB. | | | | | | | | | | GO:0007010; P:cytoskeleton organization; ISS:UniProtKB. | 19 | Q9VSH4 | 652 | CPSF6_DROME Cleavage and polyadenylation spec... | 113 | 0.0000003 | 56.2 | 35 | 52 | GO:0005849; C:mRNA cleavage factor complex; ISS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 20 | Q6DDW4 | 548 | CPSF6_XENLA Cleavage and polyadenylation spec... | 64 | 0.0002 | 47.4 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 21 | Q6NWC6 | 545 | CPSF6_DANRE Cleavage and polyadenylation spec... | 64 | 0.0003 | 47 | 36 | 56 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 22 | Q5ZL34 | 551 | CPSF6_CHICK Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 23 | Q6NVF9 | 551 | CPSF6_MOUSE Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 24 | Q16630 | 551 | CPSF6_HUMAN Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB.::GO:0042382; C:paraspeckles; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:MGI. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0051262; P:protein tetramerization; IDA:UniProtKB. | 25 | Q0P5D2 | 551 | CPSF6_BOVIN Cleavage and polyadenylation spec... | 60 | 0.002 | 43.9 | 32 | 62 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 26 | Q8BTV2 | 471 | CPSF7_MOUSE Cleavage and polyadenylation spec... | 58 | 0.005 | 42.7 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 27 | Q8N684 | 471 | CPSF7_HUMAN Cleavage and polyadenylation spec... | 58 | 0.005 | 42.7 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0051262; P:protein tetramerization; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 28 | Q5XI29 | 462 | CPSF7_RAT Cleavage and polyadenylation specif... | 58 | 0.005 | 42.7 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 29 | O94432 | 474 | YHKF_SCHPO Uncharacterized RNA-binding protei... | 96 | 0.031 | 40 | 25 | 45 | GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; NAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase. | 30 | A7TKW4 | 1202 | SLA1_VANPO Actin cytoskeleton-regulatory comp... | 62 | 0.1 | 38.9 | 37 | 45 | GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IEA:InterPro.::GO:0030674; F:protein binding, bridging; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IEA:InterPro. | | | | | | | | | | GO:0006897; P:endocytosis; IEA:UniProtKB-KW. | 31 | Q5NVH8 | 552 | CPSF6_PONAB Cleavage and polyadenylation spec... | 49 | 0.12 | 38.5 | 35 | 61 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. |
